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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-u.5   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-r.7   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-e.2   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-m.4.bio   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-m.4.hor   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-m.4.lig   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-m.4.str   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-m.4.tis   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-u.5   UCH1   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 bra-r.6   117132575   ubiquitin carboxyl-terminal hydrolase 
 bra-r.6   103831062   ubiquitin carboxyl-terminal hydrolase 2 
 bra-r.6   117131605   ubiquitin carboxyl-terminal hydrolase 
 bna-r.1   125594120   ubiquitin carboxyl-terminal hydrolase-like 
 bna-r.1   125594094   ubiquitin carboxyl-terminal hydrolase 
 bna-r.1   125594580   ubiquitin carboxyl-terminal hydrolase 
 ghi-r.1   107949487   ubiquitin carboxyl-terminal hydrolase 2 
 ghi-r.1   107951863   ubiquitin carboxyl-terminal hydrolase 2 
 cit-r.1   102614060   ubiquitin carboxyl-terminal hydrolase 2 
 gma-u.5   100802014   ubiquitin carboxyl-terminal hydrolase 2 
 gma-u.5   100792356   ubiquitin carboxyl-terminal hydrolase 2 
 vvi-u.5   100251772   ubiquitin carboxyl-terminal hydrolase isozyme L5-like 
 ppo-u.5   7495939   ubiquitin carboxyl-terminal hydrolase 2 
 ppo-u.5   7472566   ubiquitin carboxyl-terminal hydrolase 2 
 mtr-u.5   25484600   ubiquitin carboxyl-terminal hydrolase 2 
 sly-u.5   101250723   ubiquitin carboxyl-terminal hydrolase 2 
 sot-r.1   102599895   ubiquitin carboxyl-terminal hydrolase isozyme L5 
 nta-r.1   107828186   ubiquitin carboxyl-terminal hydrolase 2 
 nta-r.1   107772415   ubiquitin carboxyl-terminal hydrolase 2-like 
 nta-r.1   142170787   ubiquitin carboxyl-terminal hydrolase 2-like 
 osa-u.5   4328506   ubiquitin carboxyl-terminal hydrolase 2 
 osa-u.5   4331185   ubiquitin carboxyl-terminal hydrolase 2 
 zma-u.5   103653253   ubiquitin carboxyl-terminal hydrolase 2 
 zma-u.5   100191319   uncharacterized LOC100191319 
 zma-u.5   100382000   uncharacterized LOC100382000 
 tae-r.2   123144058   ubiquitin carboxyl-terminal hydrolase 2 
 tae-r.2   123129070   ubiquitin carboxyl-terminal hydrolase 2 
 tae-r.2   123132481   ubiquitin carboxyl-terminal hydrolase 2 
 hvu-r.1   123401399   ubiquitin carboxyl-terminal hydrolase 2-like 
 hvu-r.1   123403131   ubiquitin carboxyl-terminal hydrolase 2-like 
 hvu-r.1   123452690   ubiquitin carboxyl-terminal hydrolase 2-like 
 sbi-r.1   8057798   ubiquitin carboxyl-terminal hydrolase 2 
 sbi-r.1   8085256   ubiquitin carboxyl-terminal hydrolase 2 
 sbi-r.1   110434951   ubiquitin carboxyl-terminal hydrolase 2-like 
 bdi-r.1   100821010   ubiquitin carboxyl-terminal hydrolase 2 
 bdi-r.1   100842241   ubiquitin carboxyl-terminal hydrolase 2 
 cre-r.1   CHLRE_06g253300v5   uncharacterized protein 

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Top 50 coexpressed genes to UCH2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UCH2 (ath-m.9 coexpression data)

CoexMap"842876"


athUCH2 | Entrez gene ID : 842876      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 2 1 2 1 2 1 1 1 3 2 3 3 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03082 [list] [network] ATP-dependent chromatin remodeling (64 genes)
GO BP
GO:0016579 [list] [network] protein deubiquitination  (26 genes)  IDA  
GO:0010016 [list] [network] shoot system morphogenesis  (185 genes)  IGI  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IEA  
GO:0048366 [list] [network] leaf development  (371 genes)  IGI  
GO:0048367 [list] [network] shoot system development  (800 genes)  IGI  
GO CC
GO:0031011 [list] [network] Ino80 complex  (16 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (39 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_564858.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  cysk 1,  nucl_plas 1  (predict for NP_564858.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564858.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
UCH2
ath-u.5
for
UCH2
ath-r.7
for
UCH2
ath-e.2
for
UCH2
ath-m.4.bio
for
UCH2
ath-m.4.hor
for
UCH2
ath-m.4.lig
for
UCH2
ath-m.4.str
for
UCH2
ath-m.4.tis
for
UCH2
ath-u.5
for
UCH1
bra-r.6
for
117132575
bra-r.6
for
103831062
bra-r.6
for
117131605
bna-r.1
for
125594120
bna-r.1
for
125594094
bna-r.1
for
125594580
ghi-r.1
for
107949487
ghi-r.1
for
107951863
cit-r.1
for
102614060
gma-u.5
for
100802014
gma-u.5
for
100792356
vvi-u.5
for
100251772
ppo-u.5
for
7495939
ppo-u.5
for
7472566
mtr-u.5
for
25484600
sly-u.5
for
101250723
sot-r.1
for
102599895
nta-r.1
for
107828186
nta-r.1
for
107772415
nta-r.1
for
142170787
osa-u.5
for
4328506
osa-u.5
for
4331185
zma-u.5
for
103653253
zma-u.5
for
100191319
zma-u.5
for
100382000
tae-r.2
for
123144058
tae-r.2
for
123129070
tae-r.2
for
123132481
hvu-r.1
for
123401399
hvu-r.1
for
123403131
hvu-r.1
for
123452690
sbi-r.1
for
8057798
sbi-r.1
for
8085256
sbi-r.1
for
110434951
bdi-r.1
for
100821010
bdi-r.1
for
100842241
cre-r.1
for
CHLRE_06g253300v5


Ortholog ID: 3974
Species ath ath bra bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol UCH2 UCH1 LOC117132575 LOC103831062 LOC117131604 LOC125594120 LOC106433025 LOC111199284 LOC107949487 LOC107951863 LOC102614060 LOC100802014 LOC100792356 LOC100251772 LOC7495939 LOC7472566 LOC25484600 LOC101250723 LOC102599895 LOC107828186 LOC107772415 LOC142170787 LOC4328506 LOC4331185 LOC103653253 LOC100191319 LOC100382000 LOC123132481 LOC123136552 LOC123139950 LOC123401399 LOC123403131 LOC123452690 LOC8057798 LOC8085256 LOC110434951 LOC100821010 LOC100842241 CHLRE_06g253300v5
Function* Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase-like ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase isozyme L5-like ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase isozyme L5 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 uncharacterized LOC100191319 uncharacterized LOC100382000 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 6
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot04626 Plant-pathogen interaction 2
sot03082 ATP-dependent chromatin remodeling 2
sot03030 DNA replication 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03082 ATP-dependent chromatin remodeling 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 5
nta00010 Glycolysis / Gluconeogenesis 4
nta03082 ATP-dependent chromatin remodeling 3
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta03050 Proteasome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03050 Proteasome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 9
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03082 ATP-dependent chromatin remodeling 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03018 RNA degradation 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
bdi00780 Biotin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
cre03040 Spliceosome 3
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842876 831492 117132575 103831062 117131604 125594120 106433025 111199284 107949487 107951863 102614060 100802014 100792356 100251772 7495939 7472566 25484600 101250723 102599895 107828186 107772415 142170787 4328506 4331185 103653253 100191319 100382000 123132481 123136552 123139950 123401399 123403131 123452690 8057798 8085256 110434951 100821010 100842241 5722155
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