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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   LBD40   LOB domain-containing protein 40 
 ath-u.5   LBD40   LOB domain-containing protein 40 
 ath-r.7   LBD40   LOB domain-containing protein 40 
 ath-e.2   LBD40   LOB domain-containing protein 40 
 ath-m.4.bio   LBD40   LOB domain-containing protein 40 
 ath-m.4.hor   LBD40   LOB domain-containing protein 40 
 ath-m.4.lig   LBD40   LOB domain-containing protein 40 
 ath-m.4.str   LBD40   LOB domain-containing protein 40 
 ath-m.4.tis   LBD40   LOB domain-containing protein 40 
 ath-u.5   LBD41   LOB domain-containing protein 41 
 bra-r.6   103858968   LOB domain-containing protein 41 
 bra-r.6   103843350   LOB domain-containing protein 41 
 bna-r.1   125583336   LOB domain-containing protein 41-like 
 bna-r.1   125580824   LOB domain-containing protein 41-like 
 bna-r.1   106381058   LOB domain-containing protein 40 
 ghi-r.1   107909577   LOB domain-containing protein 42 
 ghi-r.1   107892028   LOB domain-containing protein 40 
 ghi-r.1   107925380   LOB domain-containing protein 42 
 cit-r.1   102626226   LOB domain-containing protein 41 
 gma-u.5   100814175   LOB domain-containing protein 41 
 gma-u.5   LBD37   LBD domain-containing transcription factor 
 gma-u.5   100807854   LOB domain-containing protein 41 
 vvi-u.5   100261743   LOB domain-containing protein 41-like 
 vvi-u.5   100254184   LOB domain-containing protein 40 
 ppo-u.5   7477423   LOB domain-containing protein 41 
 mtr-u.5   25497412   LOB domain-containing protein 41 
 mtr-u.5   11407695   LOB domain-containing protein 40 
 sly-u.5   101244335   LOB domain-containing protein 40 
 sly-u.5   101254088   LOB domain-containing protein 42 
 sly-u.5   101257056   LOB domain-containing protein 40 
 sot-r.1   102606392   LOB domain-containing protein 40-like 
 sot-r.1   102595607   LOB domain-containing protein 41-like 
 sot-r.1   102602683   LOB domain-containing protein 41 
 nta-r.1   107762917   LOB domain-containing protein 41-like 
 nta-r.1   107799348   LOB domain-containing protein 41-like 
 nta-r.1   107786607   LOB domain-containing protein 40-like 
 osa-u.5   4324028   LOB domain-containing protein 40 
 osa-u.5   4325972   LOB domain-containing protein 40 
 zma-u.5   100282086   seed specific protein Bn15D17A 
 zma-u.5   103635844   LOB domain-containing protein 40 
 zma-u.5   103649851   LOB domain-containing protein 40 
 tae-r.2   123068766   LOB domain-containing protein 42 
 tae-r.2   123057887   LOB domain-containing protein 41 
 tae-r.2   123053033   LOB domain-containing protein 40 
 hvu-r.1   123439421   LOB domain-containing protein 41-like 
 hvu-r.1   123426422   LOB domain-containing protein 40-like 
 sbi-r.1   8069839   LOB domain-containing protein 41 
 sbi-r.1   8067520   uncharacterized LOC8067520 
 sbi-r.1   8073359   LOB domain-containing protein 42 
 bdi-r.1   100821648   LOB domain-containing protein 42 
 bdi-r.1   112268913   LOB domain-containing protein 42-like 

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Top 50 coexpressed genes to LBD40 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LBD40 (ath-m.9 coexpression data)

CoexMap"843030"


athLBD40 | Entrez gene ID : 843030      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 3 2 1 2 3 3 3 2 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009739 [list] [network] response to gibberellin  (125 genes)  IEP  
GO CC
GO MF
GO:0001217 [list] [network] DNA-binding transcription repressor activity  (23 genes)  IDA  
Protein NP_176881.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1  (predict for NP_176881.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for NP_176881.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
LBD40
ath-u.5
for
LBD40
ath-r.7
for
LBD40
ath-e.2
for
LBD40
ath-m.4.bio
for
LBD40
ath-m.4.hor
for
LBD40
ath-m.4.lig
for
LBD40
ath-m.4.str
for
LBD40
ath-m.4.tis
for
LBD40
ath-u.5
for
LBD41
bra-r.6
for
103858968
bra-r.6
for
103843350
bna-r.1
for
125583336
bna-r.1
for
125580824
bna-r.1
for
106381058
ghi-r.1
for
107909577
ghi-r.1
for
107892028
ghi-r.1
for
107925380
cit-r.1
for
102626226
gma-u.5
for
100814175
gma-u.5
for
LBD37
gma-u.5
for
100807854
vvi-u.5
for
100261743
vvi-u.5
for
100254184
ppo-u.5
for
7477423
mtr-u.5
for
25497412
mtr-u.5
for
11407695
sly-u.5
for
101244335
sly-u.5
for
101254088
sly-u.5
for
101257056
sot-r.1
for
102606392
sot-r.1
for
102595607
sot-r.1
for
102602683
nta-r.1
for
107762917
nta-r.1
for
107799348
nta-r.1
for
107786607
osa-u.5
for
4324028
osa-u.5
for
4325972
zma-u.5
for
100282086
zma-u.5
for
103635844
zma-u.5
for
103649851
tae-r.2
for
123068766
tae-r.2
for
123057887
tae-r.2
for
123053033
hvu-r.1
for
123439421
hvu-r.1
for
123426422
sbi-r.1
for
8069839
sbi-r.1
for
8067520
sbi-r.1
for
8073359
bdi-r.1
for
100821648
bdi-r.1
for
112268913


Ortholog ID: 1426
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LBD40 LBD41 LOC103858968 LOC103843350 LOC125580824 LOC106381058 LOC106438940 LOC107892028 LOC107942734 LOC107886638 LOC102626226 LOC100814175 LBD35 LOC100786490 LOC100261743 LOC100245622 LOC18099497 LOC25497412 LOC11407695 LOC101244335 LOC101254088 LOC101257056 LOC102606392 LOC102595607 LOC102602683 LOC107799348 LOC107811176 LOC107814437 LOC4324028 LOC4325972 LOC103635844 LOC103649851 LOC100283251 LOC123068766 LOC123045197 LOC123108444 LOC123439421 LOC123426422 LOC8067520 LOC8073359 LOC8067521 LOC100821648 LOC112268913
Function* LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 41-like LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 42 LOB domain-containing protein 41 LOB domain-containing protein 41 LBD domain-containing transcription factor LOB domain-containing protein 41 LOB domain-containing protein 41-like LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 40 LOB domain-containing protein 40 LOB domain-containing protein 42 LOB domain-containing protein 40 LOB domain-containing protein 40-like LOB domain-containing protein 41-like LOB domain-containing protein 41 LOB domain-containing protein 41-like LOB domain-containing protein 41-like LOB domain-containing protein 41-like LOB domain-containing protein 40 LOB domain-containing protein 40 LOB domain-containing protein 40 LOB domain-containing protein 40 seed specific protein Bn15D17A LOB domain-containing protein 42 LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 41-like LOB domain-containing protein 40-like uncharacterized LOC8067520 LOB domain-containing protein 42 LOB domain-containing protein 42 LOB domain-containing protein 42 LOB domain-containing protein 42-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 3
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 3
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
osa00941 Flavonoid biosynthesis 2
osa00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 6
osa04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
tae00941 Flavonoid biosynthesis 4
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 3
bdi04626 Plant-pathogen interaction 2
bdi00620 Pyruvate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 6
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi00620 Pyruvate metabolism 3
bdi00350 Tyrosine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843030 821112 103858968 103843350 125580824 106381058 106438940 107892028 107942734 107886638 102626226 100814175 100789066 100786490 100261743 100245622 18099497 25497412 11407695 101244335 101254088 101257056 102606392 102595607 102602683 107799348 107811176 107814437 4324028 4325972 103635844 103649851 100283251 123068766 123045197 123108444 123439421 123426422 8067520 8073359 8067521 100821648 112268913
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