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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257056   LOB domain-containing protein 40 
 sly-r.6   101257056   LOB domain-containing protein 40 
 sly-u.5   101254088   LOB domain-containing protein 42 
 sly-u.5   101244335   LOB domain-containing protein 40 
 sot-r.1   102595607   LOB domain-containing protein 41-like 
 sot-r.1   102602683   LOB domain-containing protein 41 
 sot-r.1   102606392   LOB domain-containing protein 40-like 
 nta-r.1   107786607   LOB domain-containing protein 40-like 
 nta-r.1   107799348   LOB domain-containing protein 41-like 
 nta-r.1   107762917   LOB domain-containing protein 41-like 
 ath-u.5   LBD41   LOB domain-containing protein 41 
 ath-u.5   LBD40   LOB domain-containing protein 40 
 gma-u.5   LBD37   LBD domain-containing transcription factor 
 gma-u.5   100807854   LOB domain-containing protein 41 
 gma-u.5   LBD35   LBD domain-containing transcription factor 
 bra-r.6   103843350   LOB domain-containing protein 41 
 bra-r.6   103858968   LOB domain-containing protein 41 
 vvi-u.5   100261743   LOB domain-containing protein 41-like 
 vvi-u.5   100254184   LOB domain-containing protein 40 
 ppo-u.5   7477423   LOB domain-containing protein 41 
 ppo-u.5   18099497   LOB domain-containing protein 41 
 mtr-u.5   11407695   LOB domain-containing protein 40 
 mtr-u.5   25497412   LOB domain-containing protein 41 
 ghi-r.1   107909577   LOB domain-containing protein 42 
 ghi-r.1   107892028   LOB domain-containing protein 40 
 ghi-r.1   107925380   LOB domain-containing protein 42 
 bna-r.1   125583336   LOB domain-containing protein 41-like 
 bna-r.1   125580824   LOB domain-containing protein 41-like 
 bna-r.1   106381058   LOB domain-containing protein 40 
 cit-r.1   102626226   LOB domain-containing protein 41 
 osa-u.5   4325972   LOB domain-containing protein 40 
 osa-u.5   4324028   LOB domain-containing protein 40 
 zma-u.5   100283251   seed specific protein Bn15D17A 
 zma-u.5   100282086   seed specific protein Bn15D17A 
 zma-u.5   103635844   LOB domain-containing protein 40 
 tae-r.2   123068766   LOB domain-containing protein 42 
 tae-r.2   123057887   LOB domain-containing protein 41 
 tae-r.2   123053033   LOB domain-containing protein 40 
 hvu-r.1   123439421   LOB domain-containing protein 41-like 
 hvu-r.1   123426422   LOB domain-containing protein 40-like 
 sbi-r.1   8067520   uncharacterized LOC8067520 
 sbi-r.1   8067521   LOB domain-containing protein 42 
 sbi-r.1   8069839   LOB domain-containing protein 41 
 bdi-r.1   112268913   LOB domain-containing protein 42-like 
 bdi-r.1   100821648   LOB domain-containing protein 42 

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Top 50 coexpressed genes to 101257056 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257056 (sly-u.5 coexpression data)

CoexMap"101257056"


slyLOC101257056 | Entrez gene ID : 101257056      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 3 2 2 2 2 3 3 1 2 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (1953 genes)  IEA  
GO CC
GO MF
Protein XP_004235815.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_004235815.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_004235815.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257056
sly-r.6
for
101257056
sly-u.5
for
101254088
sly-u.5
for
101244335
sot-r.1
for
102595607
sot-r.1
for
102602683
sot-r.1
for
102606392
nta-r.1
for
107786607
nta-r.1
for
107799348
nta-r.1
for
107762917
ath-u.5
for
LBD41
ath-u.5
for
LBD40
gma-u.5
for
LBD37
gma-u.5
for
100807854
gma-u.5
for
LBD35
bra-r.6
for
103843350
bra-r.6
for
103858968
vvi-u.5
for
100261743
vvi-u.5
for
100254184
ppo-u.5
for
7477423
ppo-u.5
for
18099497
mtr-u.5
for
11407695
mtr-u.5
for
25497412
ghi-r.1
for
107909577
ghi-r.1
for
107892028
ghi-r.1
for
107925380
bna-r.1
for
125583336
bna-r.1
for
125580824
bna-r.1
for
106381058
cit-r.1
for
102626226
osa-u.5
for
4325972
osa-u.5
for
4324028
zma-u.5
for
100283251
zma-u.5
for
100282086
zma-u.5
for
103635844
tae-r.2
for
123068766
tae-r.2
for
123057887
tae-r.2
for
123053033
hvu-r.1
for
123439421
hvu-r.1
for
123426422
sbi-r.1
for
8067520
sbi-r.1
for
8067521
sbi-r.1
for
8069839
bdi-r.1
for
112268913
bdi-r.1
for
100821648


Ortholog ID: 1426
Species sly sly sly sot sot sot nta nta nta ath ath gma gma gma bra bra vvi vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC101257056 LOC101254088 LOC101244335 LOC102595607 LOC102602683 LOC102606392 LOC107799348 LOC107811176 LOC107814437 LBD41 LBD40 LBD35 LOC100786490 LOC100814175 LOC103843350 LOC103858968 LOC100261743 LOC100245622 LOC18099497 LOC11407695 LOC25497412 LOC107892028 LOC107942734 LOC107886638 LOC125580824 LOC106381058 LOC106438940 LOC102626226 LOC4325972 LOC4324028 LOC100283251 LOC103635844 LOC103649851 LOC123068766 LOC123045197 LOC123108444 LOC123439421 LOC123426422 LOC8067520 LOC8067521 LOC8073359 LOC112268913 LOC100821648
Function* LOB domain-containing protein 40 LOB domain-containing protein 42 LOB domain-containing protein 40 LOB domain-containing protein 41-like LOB domain-containing protein 41 LOB domain-containing protein 40-like LOB domain-containing protein 41-like LOB domain-containing protein 41-like LOB domain-containing protein 41-like LOB domain-containing protein 41 LOB domain-containing protein 40 LBD domain-containing transcription factor LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 41-like LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 42 LOB domain-containing protein 41-like LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 41 LOB domain-containing protein 40 LOB domain-containing protein 40 seed specific protein Bn15D17A LOB domain-containing protein 40 LOB domain-containing protein 40 LOB domain-containing protein 42 LOB domain-containing protein 40 LOB domain-containing protein 41 LOB domain-containing protein 41-like LOB domain-containing protein 40-like uncharacterized LOC8067520 LOB domain-containing protein 42 LOB domain-containing protein 42 LOB domain-containing protein 42-like LOB domain-containing protein 42
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 3
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 3
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 6
osa04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
osa00941 Flavonoid biosynthesis 2
osa00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
tae00941 Flavonoid biosynthesis 4
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 6
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi00620 Pyruvate metabolism 3
bdi00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 3
bdi04626 Plant-pathogen interaction 2
bdi00620 Pyruvate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257056 101254088 101244335 102595607 102602683 102606392 107799348 107811176 107814437 821112 843030 100789066 100786490 100814175 103843350 103858968 100261743 100245622 18099497 11407695 25497412 107892028 107942734 107886638 125580824 106381058 106438940 102626226 4325972 4324028 100283251 103635844 103649851 123068766 123045197 123108444 123439421 123426422 8067520 8067521 8073359 112268913 100821648
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