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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SEC6   SEC6 
 ath-u.5   SEC6   SEC6 
 ath-r.7   SEC6   SEC6 
 ath-e.2   SEC6   SEC6 
 ath-m.4.bio   SEC6   SEC6 
 ath-m.4.hor   SEC6   SEC6 
 ath-m.4.lig   SEC6   SEC6 
 ath-m.4.str   SEC6   SEC6 
 ath-m.4.tis   SEC6   SEC6 
 bra-r.6   103830830   exocyst complex component SEC6 
 bra-r.6   103831691   exocyst complex component SEC6 
 bna-r.1   106353750   exocyst complex component SEC6-like 
 bna-r.1   106354173   exocyst complex component SEC6 
 bna-r.1   106401126   exocyst complex component SEC6 
 ghi-r.1   107914448   exocyst complex component SEC6 
 ghi-r.1   107897327   exocyst complex component SEC6 
 cit-r.1   102611657   exocyst complex component SEC6 
 cit-r.1   102611956   exocyst complex component SEC6-like 
 gma-u.5   102660044   exocyst complex component SEC6 
 gma-u.5   100799529   exocyst complex component SEC6 
 gma-u.5   100790857   exocyst complex component SEC6 
 vvi-u.5   100247582   exocyst complex component SEC6 
 vvi-u.5   100261717   exocyst complex component SEC6 
 ppo-u.5   7467449   exocyst complex component SEC6 
 ppo-u.5   18104503   exocyst complex component SEC6 
 mtr-u.5   11424015   exocyst complex component SEC6 
 sly-u.5   101261809   exocyst complex component SEC6 
 sot-r.1   102593819   exocyst complex component SEC6 
 nta-r.1   107822645   exocyst complex component SEC6 
 nta-r.1   107801946   exocyst complex component SEC6 
 osa-u.5   9268086   exocyst complex component SEC6 
 zma-u.5   100276416   exocyst complex component SEC6 
 zma-u.5   103628856   exocyst complex component SEC6 
 tae-r.2   123145477   exocyst complex component SEC6 
 tae-r.2   123128363   exocyst complex component SEC6 
 tae-r.2   123138215   exocyst complex component SEC6 
 hvu-r.1   123401474   exocyst complex component SEC6 
 sbi-r.1   8075704   exocyst complex component SEC6 
 bdi-r.1   100830739   exocyst complex component SEC6 
 cre-r.1   CHLRE_17g744847v5   uncharacterized protein 

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Top 50 coexpressed genes to SEC6 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SEC6 (ath-m.9 coexpression data)

CoexMap"843512"


athSEC6 | Entrez gene ID : 843512      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 2 3 2 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0060321 [list] [network] acceptance of pollen  (12 genes)  IMP  
GO:0009846 [list] [network] pollen germination  (77 genes)  IGI  
GO:0009860 [list] [network] pollen tube growth  (151 genes)  IGI  
GO CC
GO:0000145 [list] [network] exocyst  (11 genes)  IDA  
GO:0070062 [list] [network] extracellular exosome  (12 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001185374.1 [sequence] [blastp]
NP_565026.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  vacu 1,  pero 1  (predict for NP_001185374.1)
chlo 3,  nucl 3,  E.R. 3,  cyto 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_565026.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001185374.1)
other 7  (predict for NP_565026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SEC6
ath-u.5
for
SEC6
ath-r.7
for
SEC6
ath-e.2
for
SEC6
ath-m.4.bio
for
SEC6
ath-m.4.hor
for
SEC6
ath-m.4.lig
for
SEC6
ath-m.4.str
for
SEC6
ath-m.4.tis
for
SEC6
bra-r.6
for
103830830
bra-r.6
for
103831691
bna-r.1
for
106353750
bna-r.1
for
106354173
bna-r.1
for
106401126
ghi-r.1
for
107914448
ghi-r.1
for
107897327
cit-r.1
for
102611657
cit-r.1
for
102611956
gma-u.5
for
102660044
gma-u.5
for
100799529
gma-u.5
for
100790857
vvi-u.5
for
100247582
vvi-u.5
for
100261717
ppo-u.5
for
7467449
ppo-u.5
for
18104503
mtr-u.5
for
11424015
sly-u.5
for
101261809
sot-r.1
for
102593819
nta-r.1
for
107822645
nta-r.1
for
107801946
osa-u.5
for
9268086
zma-u.5
for
100276416
zma-u.5
for
103628856
tae-r.2
for
123145477
tae-r.2
for
123128363
tae-r.2
for
123138215
hvu-r.1
for
123401474
sbi-r.1
for
8075704
bdi-r.1
for
100830739
cre-r.1
for
CHLRE_17g744847v5


Ortholog ID: 6746
Species ath bra bra bna bna bna ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol SEC6 LOC103830830 LOC103831691 LOC106353750 LOC106401126 LOC106432301 LOC107914448 LOC107897327 LOC102611657 LOC102611956 LOC102660044 LOC100799529 LOC100790857 LOC100247582 LOC100261717 LOC7467449 LOC18104503 LOC11424015 LOC101261809 LOC102593819 LOC107822645 LOC107801946 LOC9268086 LOC100276416 LOC103628856 LOC123145477 LOC123128363 LOC123138215 LOC123401474 LOC8075704 LOC100830739 CHLRE_17g744847v5
Function* SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6-like exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6-like exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 exocyst complex component SEC6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03420 Nucleotide excision repair 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00760 Nicotinate and nicotinamide metabolism 2
cit01240 Biosynthesis of cofactors 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03083 Polycomb repressive complex 2
vvi03040 Spliceosome 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr03083 Polycomb repressive complex 3
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843512 103830830 103831691 106353750 106401126 106432301 107914448 107897327 102611657 102611956 102660044 100799529 100790857 100247582 100261717 7467449 18104503 11424015 101261809 102593819 107822645 107801946 9268086 100276416 103628856 123145477 123128363 123138215 123401474 8075704 100830739 5729138
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