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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G76920   F-box family protein 
 ath-u.5   AT1G76920   F-box family protein 
 ath-r.7   AT1G76920   F-box family protein 
 ath-e.2   AT1G76920   F-box family protein 
 ath-m.4.bio   AT1G76920   F-box family protein 
 ath-m.4.hor   AT1G76920   F-box family protein 
 ath-m.4.lig   AT1G76920   F-box family protein 
 ath-m.4.str   AT1G76920   F-box family protein 
 ath-m.4.tis   AT1G76920   F-box family protein 
 bra-r.6   103830589   SKP1-interacting partner 15 
 bna-r.1   106353496   SKP1-interacting partner 15 
 bna-r.1   106386171   SKP1-interacting partner 15 
 ghi-r.1   121229054   SKP1-interacting partner 15 
 ghi-r.1   107905235   SKP1-interacting partner 15 
 cit-r.1   102629268   SKP1-interacting partner 15 
 gma-u.5   100804297   SKP1-interacting partner 15 
 vvi-u.5   100253011   SKP1-interacting partner 15 
 ppo-u.5   7467826   SKP1-interacting partner 15 
 ppo-u.5   7469213   SKP1-interacting partner 15 
 mtr-u.5   25496462   SKP1-interacting partner 15 
 mtr-u.5   25496077   SKP1-interacting partner 15 
 sly-u.5   101262613   SKP1-interacting partner 15 
 sot-r.1   102578850   SKP1-interacting partner 15 
 nta-r.1   107801906   SKP1-interacting partner 15 
 nta-r.1   107790293   SKP1-interacting partner 15 
 osa-u.5   4337474   SKP1-interacting partner 15 
 zma-u.5   103648491   SKP1-interacting partner 15-like 
 zma-u.5   103642218   SKP1-interacting partner 15-like 
 tae-r.2   123055323   SKP1-interacting partner 15 
 tae-r.2   123191146   SKP1-interacting partner 15 
 tae-r.2   123047524   SKP1-interacting partner 15 
 hvu-r.1   123428501   SKP1-interacting partner 15 
 sbi-r.1   8055460   SKP1-interacting partner 15 
 bdi-r.1   100837040   SKP1-interacting partner 15 

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Top 50 coexpressed genes to AT1G76920 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G76920 (ath-m.9 coexpression data)

CoexMap"844027"


athAT1G76920 | Entrez gene ID : 844027      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 2 2 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  IDA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IDA TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565142.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  mito 1,  plas 1,  extr 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_565142.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_565142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G76920
ath-u.5
for
AT1G76920
ath-r.7
for
AT1G76920
ath-e.2
for
AT1G76920
ath-m.4.bio
for
AT1G76920
ath-m.4.hor
for
AT1G76920
ath-m.4.lig
for
AT1G76920
ath-m.4.str
for
AT1G76920
ath-m.4.tis
for
AT1G76920
bra-r.6
for
103830589
bna-r.1
for
106353496
bna-r.1
for
106386171
ghi-r.1
for
121229054
ghi-r.1
for
107905235
cit-r.1
for
102629268
gma-u.5
for
100804297
vvi-u.5
for
100253011
ppo-u.5
for
7467826
ppo-u.5
for
7469213
mtr-u.5
for
25496462
mtr-u.5
for
25496077
sly-u.5
for
101262613
sot-r.1
for
102578850
nta-r.1
for
107801906
nta-r.1
for
107790293
osa-u.5
for
4337474
zma-u.5
for
103648491
zma-u.5
for
103642218
tae-r.2
for
123055323
tae-r.2
for
123191146
tae-r.2
for
123047524
hvu-r.1
for
123428501
sbi-r.1
for
8055460
bdi-r.1
for
100837040


Ortholog ID: 9883
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT1G76920 LOC103830589 LOC106353496 LOC106386171 LOC121229054 LOC107905235 LOC102629268 LOC100804297 LOC100253011 LOC7467826 LOC7469213 LOC25496462 LOC25496077 LOC101262613 LOC102578850 LOC107801906 LOC107790293 LOC4337474 LOC103648491 LOC103642218 LOC123055323 LOC123191146 LOC123047524 LOC123428501 LOC8055460 LOC100837040
Function* F-box family protein SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15-like SKP1-interacting partner 15-like SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15 SKP1-interacting partner 15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03250 Viral life cycle - HIV-1 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844027 103830589 106353496 106386171 121229054 107905235 102629268 100804297 100253011 7467826 7469213 25496462 25496077 101262613 102578850 107801906 107790293 4337474 103648491 103642218 123055323 123191146 123047524 123428501 8055460 100837040
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