ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100253011	SKP1-interacting partner 15
vvi-r.5	100253011	SKP1-interacting partner 15
vvi-m.5	100253011	SKP1-interacting partner 15
ath-u.5	AT1G76920	F-box family protein
gma-u.5	100804297	SKP1-interacting partner 15
bra-r.6	103830589	SKP1-interacting partner 15
ppo-u.5	7469213	SKP1-interacting partner 15
ppo-u.5	7467826	SKP1-interacting partner 15
mtr-u.5	25496462	SKP1-interacting partner 15
mtr-u.5	25496077	SKP1-interacting partner 15
ghi-r.1	121229054	SKP1-interacting partner 15
ghi-r.1	107905235	SKP1-interacting partner 15
bna-r.1	106353496	SKP1-interacting partner 15
bna-r.1	106386171	SKP1-interacting partner 15
cit-r.1	102629268	SKP1-interacting partner 15
sly-u.5	101262613	SKP1-interacting partner 15
sot-r.1	102578850	SKP1-interacting partner 15
nta-r.1	107801906	SKP1-interacting partner 15
nta-r.1	107790293	SKP1-interacting partner 15
osa-u.5	4337474	SKP1-interacting partner 15
zma-u.5	103648491	SKP1-interacting partner 15-like
zma-u.5	103642218	SKP1-interacting partner 15-like
tae-r.2	123191146	SKP1-interacting partner 15
tae-r.2	123055323	SKP1-interacting partner 15
tae-r.2	123047524	SKP1-interacting partner 15
hvu-r.1	123428501	SKP1-interacting partner 15
sbi-r.1	8055460	SKP1-interacting partner 15
bdi-r.1	100837040	SKP1-interacting partner 15

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_002266510.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, mito 1, plas 1, mito_plas 1

(predict for XP_002266510.1)

Subcellular
localization
TargetP

other 8

(predict for XP_002266510.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100253011	vvi-r.5 for 100253011	vvi-m.5 for 100253011	ath-u.5 for AT1G76920	gma-u.5 for 100804297	bra-r.6 for 103830589	ppo-u.5 for 7469213	ppo-u.5 for 7467826	mtr-u.5 for 25496462	mtr-u.5 for 25496077	ghi-r.1 for 121229054	ghi-r.1 for 107905235	bna-r.1 for 106353496	bna-r.1 for 106386171	cit-r.1 for 102629268	sly-u.5 for 101262613	sot-r.1 for 102578850	nta-r.1 for 107801906	nta-r.1 for 107790293	osa-u.5 for 4337474	zma-u.5 for 103648491	zma-u.5 for 103642218	tae-r.2 for 123191146	tae-r.2 for 123055323	tae-r.2 for 123047524	hvu-r.1 for 123428501	sbi-r.1 for 8055460	bdi-r.1 for 100837040

Ortholog

Ortholog ID: 9883

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

SKP1-interacting partner 15

F-box family protein

SKP1-interacting partner 15

SKP1-interacting partner 15-like

SKP1-interacting partner 15

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2
vvi03250	Viral life cycle - HIV-1	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00020	Citrate cycle (TCA cycle)	2
ppo01200	Carbon metabolism	2
ppo01210	2-Oxocarboxylic acid metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100253011

844027

100804297

103830589

7469213

7467826

25496462

25496077

121229054

107905235

106353496

106386171

102629268

101262613

102578850

107801906

107790293

4337474

103648491

103642218

123191146

123055323

123047524

123428501

8055460

100837040

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100253011 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100253011 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	1	2	2	2	2	1	1	1	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100253011 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100253011 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**