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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ARF17   auxin response factor 17 
 ath-u.5   ARF17   auxin response factor 17 
 ath-r.7   ARF17   auxin response factor 17 
 ath-e.2   ARF17   auxin response factor 17 
 ath-m.4.bio   ARF17   auxin response factor 17 
 ath-m.4.hor   ARF17   auxin response factor 17 
 ath-m.4.lig   ARF17   auxin response factor 17 
 ath-m.4.str   ARF17   auxin response factor 17 
 ath-m.4.tis   ARF17   auxin response factor 17 
 bra-r.6   ARF17-2   auxin response factor 17 
 bra-r.6   ARF17-1   auxin response factor 17 
 bna-r.1   106400269   auxin response factor 17-like 
 bna-r.1   106368952   auxin response factor 17-like 
 bna-r.1   106354590   auxin response factor 17 
 ghi-r.1   107962460   auxin response factor 17 
 ghi-r.1   107922870   auxin response factor 17 
 ghi-r.1   107916612   auxin response factor 17 
 cit-r.1   102631447   auxin response factor 17 
 gma-u.5   100804933   auxin response factor 17 
 gma-u.5   100805638   auxin response factor 17 
 gma-u.5   102662128   auxin response factor 17 
 vvi-u.5   100255673   auxin response factor 17 
 ppo-u.5   7460924   auxin response factor 17 
 ppo-u.5   7495122   auxin response factor 17 
 mtr-u.5   11422215   auxin response factor 17 
 sly-u.5   ARF17   auxin response factor 17 
 sot-r.1   102588218   auxin response factor 17 
 nta-r.1   107765789   auxin response factor 17 
 nta-r.1   107766885   auxin response factor 17 

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Top 50 coexpressed genes to ARF17 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ARF17 (ath-m.9 coexpression data)

CoexMap"844120"


athARF17 | Entrez gene ID : 844120      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta tae zma bdi osa sbi hvu cre
Paralog 9 2 3 3 1 3 1 2 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0120195 [list] [network] positive regulation of anther dehiscence  (2 genes)  IMP  
GO:0048830 [list] [network] adventitious root development  (7 genes)  IMP  
GO:0052543 [list] [network] callose deposition in cell wall  (30 genes)  IMP  
GO:0010208 [list] [network] pollen wall assembly  (55 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  TAS  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO:0009653 [list] [network] anatomical structure morphogenesis  (987 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding  (55 genes)  IDA  
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001322496.1 [sequence] [blastp]
NP_565161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001322496.1)
nucl 10  (predict for NP_565161.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001322496.1)
other 7  (predict for NP_565161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ARF17
ath-u.5
for
ARF17
ath-r.7
for
ARF17
ath-e.2
for
ARF17
ath-m.4.bio
for
ARF17
ath-m.4.hor
for
ARF17
ath-m.4.lig
for
ARF17
ath-m.4.str
for
ARF17
ath-m.4.tis
for
ARF17
bra-r.6
for
ARF17-2
bra-r.6
for
ARF17-1
bna-r.1
for
106400269
bna-r.1
for
106368952
bna-r.1
for
106354590
ghi-r.1
for
107962460
ghi-r.1
for
107922870
ghi-r.1
for
107916612
cit-r.1
for
102631447
gma-u.5
for
100804933
gma-u.5
for
100805638
gma-u.5
for
102662128
vvi-u.5
for
100255673
ppo-u.5
for
7460924
ppo-u.5
for
7495122
mtr-u.5
for
11422215
sly-u.5
for
ARF17
sot-r.1
for
102588218
nta-r.1
for
107765789
nta-r.1
for
107766885


Ortholog ID: 11527
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta
Symbol ARF17 ARF17-2 ARF17-1 LOC106400269 LOC106354590 LOC106353451 LOC107962460 LOC107916612 LOC107905028 LOC102631447 LOC100804933 LOC100805638 LOC102662128 LOC100255673 LOC7460924 LOC7495122 LOC11422215 ARF17 LOC102588218 LOC107765789 LOC107766885
Function* auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17-like auxin response factor 17 auxin response factor 17-like auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
mtr04144 Endocytosis 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 4
sly00750 Vitamin B6 metabolism 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844120 103832213 103830547 106400269 106354590 106353451 107962460 107916612 107905028 102631447 100804933 100805638 102662128 100255673 7460924 7495122 11422215 100527977 102588218 107765789 107766885
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