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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922870   auxin response factor 17 
 ghi-r.1   107916612   auxin response factor 17 
 ghi-r.1   107905028   auxin response factor 17 
 ghi-r.1   107962460   auxin response factor 17 
 ath-u.5   ARF17   auxin response factor 17 
 bra-r.6   ARF17-2   auxin response factor 17 
 bra-r.6   ARF17-1   auxin response factor 17 
 bna-r.1   106353451   auxin response factor 17-like 
 bna-r.1   106368952   auxin response factor 17-like 
 bna-r.1   106400269   auxin response factor 17-like 
 cit-r.1   102631447   auxin response factor 17 
 gma-u.5   102662128   auxin response factor 17 
 gma-u.5   100805638   auxin response factor 17 
 gma-u.5   100804933   auxin response factor 17 
 vvi-u.5   100255673   auxin response factor 17 
 ppo-u.5   7495122   auxin response factor 17 
 ppo-u.5   7460924   auxin response factor 17 
 mtr-u.5   11422215   auxin response factor 17 
 sly-u.5   ARF17   auxin response factor 17 
 sot-r.1   102588218   auxin response factor 17 
 nta-r.1   107765789   auxin response factor 17 
 nta-r.1   107766885   auxin response factor 17 

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Top 50 coexpressed genes to 107922870 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922870 (ghi-r.1 coexpression data)

CoexMap"107922870"


ghiLOC107922870 | Entrez gene ID : 107922870    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa bdi tae zma sbi hvu cre
Paralog 4 1 2 3 1 3 1 2 1 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (1008 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016708563.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_016708563.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016708563.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922870
ghi-r.1
for
107916612
ghi-r.1
for
107905028
ghi-r.1
for
107962460
ath-u.5
for
ARF17
bra-r.6
for
ARF17-2
bra-r.6
for
ARF17-1
bna-r.1
for
106353451
bna-r.1
for
106368952
bna-r.1
for
106400269
cit-r.1
for
102631447
gma-u.5
for
102662128
gma-u.5
for
100805638
gma-u.5
for
100804933
vvi-u.5
for
100255673
ppo-u.5
for
7495122
ppo-u.5
for
7460924
mtr-u.5
for
11422215
sly-u.5
for
ARF17
sot-r.1
for
102588218
nta-r.1
for
107765789
nta-r.1
for
107766885


Ortholog ID: 11527
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sot nta nta
Symbol LOC107916612 LOC107905028 LOC107962460 ARF17 ARF17-2 ARF17-1 LOC106353451 LOC106400269 LOC106354590 LOC102631447 LOC102662128 LOC100805638 LOC100804933 LOC100255673 LOC7495122 LOC7460924 LOC11422215 ARF17 LOC102588218 LOC107765789 LOC107766885
Function* auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17-like auxin response factor 17-like auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17 auxin response factor 17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
mtr04144 Endocytosis 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 4
sly00750 Vitamin B6 metabolism 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916612 107905028 107962460 844120 103832213 103830547 106353451 106400269 106354590 102631447 102662128 100805638 100804933 100255673 7495122 7460924 11422215 100527977 102588218 107765789 107766885
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