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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-u.5   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-r.7   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-e.2   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-m.4.bio   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-m.4.hor   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-m.4.lig   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-m.4.str   AT1G79950   RAD3-like DNA-binding helicase protein 
 ath-m.4.tis   AT1G79950   RAD3-like DNA-binding helicase protein 
 bra-r.6   103830408   regulator of telomere elongation helicase 1 homolog 
 bna-r.1   106353348   regulator of telomere elongation helicase 1 homolog 
 bna-r.1   106383060   regulator of telomere elongation helicase 1 homolog 
 bna-r.1   106415668   regulator of telomere elongation helicase 1 homolog 
 ghi-r.1   107924100   regulator of telomere elongation helicase 1 homolog 
 ghi-r.1   107937350   regulator of telomere elongation helicase 1 homolog 
 cit-r.1   102618736   regulator of telomere elongation helicase 1 homolog 
 gma-u.5   100792904   regulator of telomere elongation helicase 1 homolog 
 vvi-u.5   100265202   regulator of telomere elongation helicase 1 homolog 
 mtr-u.5   11425787   regulator of telomere elongation helicase 1 homolog 
 sly-u.5   101249902   regulator of telomere elongation helicase 1 homolog 
 sot-r.1   102587877   regulator of telomere elongation helicase 1 
 nta-r.1   107778074   regulator of telomere elongation helicase 1 homolog 
 nta-r.1   107794086   regulator of telomere elongation helicase 1 homolog 
 osa-u.5   4326378   regulator of telomere elongation helicase 1 homolog 
 zma-u.5   100286037   regulator of telomere elongation helicase 1 
 tae-r.2   123061388   regulator of telomere elongation helicase 1 homolog 
 tae-r.2   123070031   regulator of telomere elongation helicase 1 homolog 
 tae-r.2   123078488   regulator of telomere elongation helicase 1 homolog 
 hvu-r.1   123443804   regulator of telomere elongation helicase 1 homolog 
 sbi-r.1   8082472   regulator of telomere elongation helicase 1 
 bdi-r.1   100823673   regulator of telomere elongation helicase 1 homolog 
 cre-r.1   CHLRE_02g089608v5   uncharacterized protein 
 cre-r.1   CHLRE_02g089600v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G79950 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G79950 (ath-m.9 coexpression data)

CoexMap"844335"


athAT1G79950 | Entrez gene ID : 844335      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 9 1 3 2 1 1 1 1 1 1 2 1 1 3 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070716 [list] [network] mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication  (1 genes)  IMP  
GO:0043007 [list] [network] maintenance of rDNA  (3 genes)  IGI IMP  
GO:0010569 [list] [network] regulation of double-strand break repair via homologous recombination  (6 genes)  IMP  
GO:0036297 [list] [network] interstrand cross-link repair  (9 genes)  IMP  
GO:0045910 [list] [network] negative regulation of DNA recombination  (10 genes)  IMP  
GO:0000723 [list] [network] telomere maintenance  (20 genes)  IMP  
GO:0000725 [list] [network] recombinational repair  (46 genes)  IMP  
GO:0006260 [list] [network] DNA replication  (66 genes)  IMP  
GO:0006310 [list] [network] DNA recombination  (113 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO:0009555 [list] [network] pollen development  (385 genes)  IGI  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001321157.1 [sequence] [blastp]
NP_001321158.1 [sequence] [blastp]
NP_001321159.1 [sequence] [blastp]
NP_001321160.1 [sequence] [blastp]
NP_001321161.1 [sequence] [blastp]
NP_001321162.1 [sequence] [blastp]
NP_178113.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for NP_001321157.1)
nucl 4,  chlo 3,  mito 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1  (predict for NP_001321158.1)
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for NP_001321159.1)
chlo 4,  nucl 4,  chlo_mito 3,  mito 1,  cyto_mito 1  (predict for NP_001321160.1)
chlo 4,  nucl 4,  chlo_mito 3,  mito 1,  cyto_mito 1  (predict for NP_001321161.1)
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for NP_001321162.1)
nucl 4,  chlo 3,  mito 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1  (predict for NP_178113.3)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001321157.1)
mito 5,  other 4  (predict for NP_001321158.1)
mito 5,  other 4  (predict for NP_001321159.1)
mito 5,  other 4  (predict for NP_001321160.1)
mito 5,  other 4  (predict for NP_001321161.1)
mito 5,  other 4  (predict for NP_001321162.1)
mito 5,  other 4  (predict for NP_178113.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G79950
ath-u.5
for
AT1G79950
ath-r.7
for
AT1G79950
ath-e.2
for
AT1G79950
ath-m.4.bio
for
AT1G79950
ath-m.4.hor
for
AT1G79950
ath-m.4.lig
for
AT1G79950
ath-m.4.str
for
AT1G79950
ath-m.4.tis
for
AT1G79950
bra-r.6
for
103830408
bna-r.1
for
106353348
bna-r.1
for
106383060
bna-r.1
for
106415668
ghi-r.1
for
107924100
ghi-r.1
for
107937350
cit-r.1
for
102618736
gma-u.5
for
100792904
vvi-u.5
for
100265202
mtr-u.5
for
11425787
sly-u.5
for
101249902
sot-r.1
for
102587877
nta-r.1
for
107778074
nta-r.1
for
107794086
osa-u.5
for
4326378
zma-u.5
for
100286037
tae-r.2
for
123061388
tae-r.2
for
123070031
tae-r.2
for
123078488
hvu-r.1
for
123443804
sbi-r.1
for
8082472
bdi-r.1
for
100823673
cre-r.1
for
CHLRE_02g089608v5
cre-r.1
for
CHLRE_02g089600v5


Ortholog ID: 9890
Species ath bra bna bna bna ghi ghi cit gma vvi mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol AT1G79950 LOC103830408 LOC106353348 LOC106383060 LOC106415668 LOC107924100 LOC107937350 LOC102618736 LOC100792904 LOC100265202 LOC11425787 LOC101249902 LOC102587877 LOC107778074 LOC107794086 LOC4326378 LOC100286037 LOC123061388 LOC123070031 LOC123078488 LOC123443804 LOC8082472 LOC100823673 CHLRE_02g089608v5 CHLRE_02g089600v5
Function* RAD3-like DNA-binding helicase protein regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 homolog regulator of telomere elongation helicase 1 regulator of telomere elongation helicase 1 homolog uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03082 ATP-dependent chromatin remodeling 3
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03010 Ribosome 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
ghi04814 Motor proteins 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03430 Mismatch repair 4
ghi04814 Motor proteins 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit03410 Base excision repair 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03430 Mismatch repair 5
gma03420 Nucleotide excision repair 4
gma03440 Homologous recombination 3
gma03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 7
sly03410 Base excision repair 3
sly03430 Mismatch repair 3
sly03013 Nucleocytoplasmic transport 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 5
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta04145 Phagosome 2
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 4
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 6
tae03013 Nucleocytoplasmic transport 4
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844335 103830408 106353348 106383060 106415668 107924100 107937350 102618736 100792904 100265202 11425787 101249902 102587877 107778074 107794086 4326378 100286037 123061388 123070031 123078488 123443804 8082472 100823673 5727456 66052305
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