ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-r.6	4338904	protein LIKE COV 2
osa-u.5	4338904	protein LIKE COV 2
osa-m.8	4338904	protein LIKE COV 2
osa-e.1	4338904	protein LIKE COV 2
osa-u.5	4339401	protein LIKE COV 1
osa-u.5	4325049	protein LIKE COV 2
tae-r.2	123063967	protein LIKE COV 1
tae-r.2	123057261	protein LIKE COV 2
tae-r.2	123182722	protein LIKE COV 1
hvu-r.1	123446602	protein LIKE COV 2-like
hvu-r.1	123444796	protein LIKE COV 2-like
hvu-r.1	123448856	protein LIKE COV 1-like
bdi-r.1	100826212	protein LIKE COV 2
bdi-r.1	100837254	protein LIKE COV 2
bdi-r.1	100843068	protein LIKE COV 1
zma-u.5	100193766	Protein LIKE COV 1
zma-u.5	100217242	COV1-like protein
zma-u.5	100273275	Protein LIKE COV 1
sbi-r.1	8063258	protein LIKE COV 1
sbi-r.1	8080385	protein LIKE COV 1
sbi-r.1	8077165	protein LIKE COV 2
ath-u.5	COV1	CONTINUOUS VASCULAR RING protein (DUF502)
ath-u.5	LCV1	uncharacterized protein
gma-u.5	100801920	protein LIKE COV 2
gma-u.5	100800188	protein LIKE COV 1
sly-u.5	101251065	protein CONTINUOUS VASCULAR RING 1
sly-u.5	101255752	protein LIKE COV 3
bra-r.6	103860245	protein CONTINUOUS VASCULAR RING 1
bra-r.6	103848382	protein CONTINUOUS VASCULAR RING 1
vvi-u.5	100266324	protein LIKE COV 2
vvi-u.5	100262854	protein CONTINUOUS VASCULAR RING 1
ppo-u.5	7489777	protein LIKE COV 2
ppo-u.5	7467805	protein LIKE COV 2
ppo-u.5	7458770	protein CONTINUOUS VASCULAR RING 1
mtr-u.5	11406550	protein LIKE COV 1
mtr-u.5	11423678	protein LIKE COV 2
ghi-r.1	107914405	protein LIKE COV 2
ghi-r.1	107907206	protein CONTINUOUS VASCULAR RING 1
ghi-r.1	107901242	protein CONTINUOUS VASCULAR RING 1
bna-r.1	106361787	protein CONTINUOUS VASCULAR RING 1
bna-r.1	106357955	protein CONTINUOUS VASCULAR RING 1
sot-r.1	102584144	protein LIKE COV 2-like
sot-r.1	102595014	protein CONTINUOUS VASCULAR RING 1-like
sot-r.1	102601749	protein LIKE COV 2-like
cit-r.1	102620902	hypothetical protein
cit-r.1	102621365	protein LIKE COV 2
cit-r.1	102610617	hypothetical protein
nta-r.1	107813890	protein LIKE COV 2
cre-r.1	CHLRE_17g741050v5	uncharacterized protein

Top 50 coexpressed genes to 4338904 (osa-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4338904 (osa-r.6 coexpression data)

CoexMap"4338904"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(532 genes)

IEA

GO MF

Protein

XP_015640797.1 [sequence] [blastp]
XP_015640798.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, plas 3, E.R. 1, golg 1, nucl_plas 1, cysk_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_015640797.1)
vacu 4, plas 3, E.R. 1, golg 1, nucl_plas 1, cysk_plas 1, mito_plas 1, cyto_plas 1	(predict for XP_015640798.1)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for XP_015640797.1)
other 8, chlo 3	(predict for XP_015640798.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-r.6 for 4338904	osa-u.5 for 4338904	osa-m.8 for 4338904	osa-e.1 for 4338904	osa-u.5 for 4339401	osa-u.5 for 4325049	tae-r.2 for 123063967	tae-r.2 for 123057261	tae-r.2 for 123182722	hvu-r.1 for 123446602	hvu-r.1 for 123444796	hvu-r.1 for 123448856	bdi-r.1 for 100826212	bdi-r.1 for 100837254	bdi-r.1 for 100843068	zma-u.5 for 100193766	zma-u.5 for 100217242	zma-u.5 for 100273275	sbi-r.1 for 8063258	sbi-r.1 for 8080385	sbi-r.1 for 8077165	ath-u.5 for COV1	ath-u.5 for LCV1	gma-u.5 for 100801920	gma-u.5 for 100800188	sly-u.5 for 101251065	sly-u.5 for 101255752	bra-r.6 for 103860245	bra-r.6 for 103848382	vvi-u.5 for 100266324	vvi-u.5 for 100262854	ppo-u.5 for 7489777	ppo-u.5 for 7467805	ppo-u.5 for 7458770	mtr-u.5 for 11406550	mtr-u.5 for 11423678	ghi-r.1 for 107914405	ghi-r.1 for 107907206	ghi-r.1 for 107901242	bna-r.1 for 106361787	bna-r.1 for 106357955	sot-r.1 for 102584144	sot-r.1 for 102595014	sot-r.1 for 102601749	cit-r.1 for 102620902	cit-r.1 for 102621365	cit-r.1 for 102610617	nta-r.1 for 107813890	cre-r.1 for CHLRE_17g741050v5

Ortholog

Ortholog ID: 805

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

COV1

LCV1

LCV2

Function^*

protein LIKE COV 1

protein LIKE COV 2

protein LIKE COV 1

protein LIKE COV 2

protein LIKE COV 2-like

protein LIKE COV 1-like

protein LIKE COV 2

protein LIKE COV 1

COV1-like protein

LCV3

protein LIKE COV 1

CONTINUOUS VASCULAR RING protein (DUF502)

uncharacterized protein

protein LIKE COV 2

protein LIKE COV 1

uncharacterized LOC100792693

protein LIKE COV 3

protein LIKE COV 2