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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7456325   pentatricopeptide repeat-containing protein At3g20730 
 ppo-u.5   7456325   pentatricopeptide repeat-containing protein At3g20730 
 ppo-r.4   7456325   pentatricopeptide repeat-containing protein At3g20730 
 bra-r.6   103835804   pentatricopeptide repeat-containing protein At3g20730 
 ghi-r.1   107929814   pentatricopeptide repeat-containing protein At3g20730 
 ghi-r.1   107902044   pentatricopeptide repeat-containing protein At3g20730 
 cit-r.1   102629517   pentatricopeptide repeat-containing protein At3g20730 
 sly-u.5   101243856   pentatricopeptide repeat-containing protein 
 sot-r.1   102587579   pentatricopeptide repeat-containing protein At3g20730 
 nta-r.1   107764614   pentatricopeptide repeat-containing protein At3g20730 
 nta-r.1   107784439   pentatricopeptide repeat-containing protein At3g20730-like 
 zma-u.5   103629919   pentatricopeptide repeat-containing protein At3g20730 
 tae-r.2   123190528   peroxidase 1 
 bdi-r.1   106865423   pentatricopeptide repeat-containing protein At3g20730 

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Top 50 coexpressed genes to 7456325 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456325 (ppo-m.4 coexpression data)

CoexMap"7456325"


ppoLOC7456325 | Entrez gene ID : 7456325    
Species ppo bra ghi cit sly sot nta zma tae bdi vvi osa bna cre mtr sbi gma ath hvu
Paralog 3 1 2 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002310672.3 [sequence] [blastp]
XP_024460894.2 [sequence] [blastp]
XP_024460895.2 [sequence] [blastp]
XP_052310292.1 [sequence] [blastp]
XP_052310293.1 [sequence] [blastp]
XP_052310294.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_002310672.3)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024460894.2)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_024460895.2)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_052310292.1)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_052310293.1)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_052310294.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_002310672.3)
other 4,  mito 3  (predict for XP_024460894.2)
other 4,  mito 3  (predict for XP_024460895.2)
other 4,  mito 3  (predict for XP_052310292.1)
other 4,  mito 3  (predict for XP_052310293.1)
other 4,  mito 3  (predict for XP_052310294.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7456325
ppo-u.5
for
7456325
ppo-r.4
for
7456325
bra-r.6
for
103835804
ghi-r.1
for
107929814
ghi-r.1
for
107902044
cit-r.1
for
102629517
sly-u.5
for
101243856
sot-r.1
for
102587579
nta-r.1
for
107764614
nta-r.1
for
107784439
zma-u.5
for
103629919
tae-r.2
for
123190528
bdi-r.1
for
106865423


Ortholog ID: 11318
Species ppo bra ghi ghi cit sly sot nta nta zma tae bdi
Symbol LOC7456325 LOC103835804 LOC107929814 LOC107902044 LOC102629517 LOC101243856 LOC102587579 LOC107764614 LOC107784439 LOC103629919 LOC123190528 LOC106865423
Function* pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730-like pentatricopeptide repeat-containing protein At3g20730 peroxidase 1 pentatricopeptide repeat-containing protein At3g20730
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03020 RNA polymerase 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi04120 Ubiquitin mediated proteolysis 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7456325 103835804 107929814 107902044 102629517 101243856 102587579 107764614 107784439 103629919 123190528 106865423
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