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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  106865423  pentatricopeptide repeat-containing protein At3g20730 
 tae-r.2  123190528  peroxidase 1 
 zma-u.5  103629919  pentatricopeptide repeat-containing protein At3g20730 
 sly-u.5  101243856  pentatricopeptide repeat-containing protein 
 bra-r.6  103835804  pentatricopeptide repeat-containing protein At3g20730 
 ppo-u.5  7456325  pentatricopeptide repeat-containing protein At3g20730 
 ghi-r.1  107929814  pentatricopeptide repeat-containing protein At3g20730 
 ghi-r.1  107902044  pentatricopeptide repeat-containing protein At3g20730 
 sot-r.1  102587579  pentatricopeptide repeat-containing protein At3g20730 
 cit-r.1  102629517  pentatricopeptide repeat-containing protein At3g20730 
 nta-r.1  107764614  pentatricopeptide repeat-containing protein At3g20730 
 nta-r.1  107784439  pentatricopeptide repeat-containing protein At3g20730-like 

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Top 50 coexpressed genes to 106865423 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106865423 (bdi-r.1 coexpression data)

CoexMap"106865423"


bdiLOC106865423 | Entrez gene ID : 106865423
Species bdi tae zma sly bra ppo ghi sot cit nta cre vvi ath mtr hvu bna osa gma sbi
Paralog 1 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_024311623.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_024311623.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_024311623.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
106865423


tae-r.2
for
123190528


zma-u.5
for
103629919


sly-u.5
for
101243856


bra-r.6
for
103835804


ppo-u.5
for
7456325


ghi-r.1
for
107929814


ghi-r.1
for
107902044


sot-r.1
for
102587579


cit-r.1
for
102629517


nta-r.1
for
107764614


nta-r.1
for
107784439



Ortholog ID: 11318
Species bdi tae zma sly bra ppo ghi ghi sot cit nta nta
Symbol LOC106865423 LOC123190528 LOC103629919 LOC101243856 LOC103835804 LOC7456325 LOC107929814 LOC107902044 LOC102587579 LOC102629517 LOC107764614 LOC107784439
Function* pentatricopeptide repeat-containing protein At3g20730 peroxidase 1 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730 pentatricopeptide repeat-containing protein At3g20730-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi04120 Ubiquitin mediated proteolysis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03020 RNA polymerase 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106865423 123190528 103629919 101243856 103835804 7456325 107929814 107902044 102587579 102629517 107764614 107784439
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