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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7466002   protein TRANSPARENT TESTA 9 
 ppo-u.5   7466002   protein TRANSPARENT TESTA 9 
 ppo-r.4   7466002   protein TRANSPARENT TESTA 9 
 gma-u.5   100815334   protein TRANSPARENT TESTA 9 
 gma-u.5   102666080   protein TRANSPARENT TESTA 9 
 mtr-u.5   25483701   protein TRANSPARENT TESTA 9 
 vvi-u.5   100854209   protein TRANSPARENT TESTA 9 
 ghi-r.1   107889433   protein TRANSPARENT TESTA 9 
 ghi-r.1   107891179   protein TRANSPARENT TESTA 9 
 cit-r.1   102620086   protein TRANSPARENT TESTA 9-like 

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Top 50 coexpressed genes to 7466002 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466002 (ppo-m.4 coexpression data)

CoexMap"7466002"


ppoLOC7466002 | Entrez gene ID : 7466002    
Species ppo gma mtr vvi ghi cit cre bra ath hvu nta bna tae bdi osa zma sly sot sbi
Paralog 3 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901096 [list] [network] regulation of autophagosome maturation  (3 genes)  IEA  
GO:0008333 [list] [network] endosome to lysosome transport  (8 genes)  IEA  
GO:0016197 [list] [network] endosomal transport  (91 genes)  IEA  
GO CC
GO:0036020 [list] [network] endolysosome membrane  (3 genes)  IEA  
GO:0005770 [list] [network] late endosome  (44 genes)  IEA  
GO MF
Protein XP_024459611.1 [sequence] [blastp]
XP_024459612.1 [sequence] [blastp]
XP_024459613.1 [sequence] [blastp]
XP_024459614.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  mito 2,  nucl_plas 2,  plas 2,  cyto_mito 1  (predict for XP_024459611.1)
nucl 3,  plas 3,  nucl_plas 3,  mito 1  (predict for XP_024459612.1)
plas 3,  nucl 2,  mito 1,  golg_plas 1,  chlo 1,  cyto_mito 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_024459613.1)
plas 7,  E.R. 2  (predict for XP_024459614.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_024459611.1)
mito 6,  other 4  (predict for XP_024459612.1)
mito 6,  other 4  (predict for XP_024459613.1)
mito 6,  other 4  (predict for XP_024459614.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7466002
ppo-u.5
for
7466002
ppo-r.4
for
7466002
gma-u.5
for
100815334
gma-u.5
for
102666080
mtr-u.5
for
25483701
vvi-u.5
for
100854209
ghi-r.1
for
107889433
ghi-r.1
for
107891179
cit-r.1
for
102620086


Ortholog ID: 17666
Species ppo gma gma mtr vvi ghi ghi cit
Symbol LOC7466002 LOC100815334 LOC102666080 LOC25483701 LOC100854209 LOC107889433 LOC107891179 LOC102620086
Function* protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7466002 100815334 102666080 25483701 100854209 107889433 107891179 102620086
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