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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7491963   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ppo-u.5   7491963   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ppo-r.4   7491963   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 gma-u.5   100810879   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 gma-u.5   100818800   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 mtr-u.5   25484071   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ath-u.5   SGR9   RING/U-box superfamily protein 
 bra-r.6   103850455   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 bra-r.6   103847429   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 vvi-u.5   104880042   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ghi-r.1   107899262   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ghi-r.1   107948346   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 cit-r.1   102609490   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 sly-u.5   104644293   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 sot-r.1   102584058   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 
 sot-r.1   102602984   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 
 nta-r.1   107825883   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 nta-r.1   107812673   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 
 nta-r.1   107792649   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 

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Top 50 coexpressed genes to 7491963 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7491963 (ppo-m.4 coexpression data)

CoexMap"7491963"


ppoLOC7491963 | Entrez gene ID : 7491963    
Species ppo gma mtr ath bra vvi ghi cit sly sot nta zma bna bdi sbi tae osa hvu cre
Paralog 3 2 1 1 2 1 2 1 1 2 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
Protein XP_002308497.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  nucl 2,  chlo 1,  cysk 1  (predict for XP_002308497.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_002308497.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7491963
ppo-u.5
for
7491963
ppo-r.4
for
7491963
gma-u.5
for
100810879
gma-u.5
for
100818800
mtr-u.5
for
25484071
ath-u.5
for
SGR9
bra-r.6
for
103850455
bra-r.6
for
103847429
vvi-u.5
for
104880042
ghi-r.1
for
107899262
ghi-r.1
for
107948346
cit-r.1
for
102609490
sly-u.5
for
104644293
sot-r.1
for
102584058
sot-r.1
for
102602984
nta-r.1
for
107825883
nta-r.1
for
107812673
nta-r.1
for
107792649


Ortholog ID: 9108
Species ppo gma gma mtr ath bra bra vvi ghi ghi cit sly sot sot nta nta nta
Symbol LOC7491963 LOC100810879 LOC100818800 LOC25484071 SGR9 LOC103850455 LOC103847429 LOC104880042 LOC107899262 LOC107948346 LOC102609490 LOC104644293 LOC102584058 LOC102602984 LOC107812673 LOC107792649 LOC107781759
Function* E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic RING/U-box superfamily protein E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7491963 100810879 100818800 25484071 831806 103850455 103847429 104880042 107899262 107948346 102609490 104644293 102584058 102602984 107812673 107792649 107781759
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