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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609490   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ath-u.5   SGR9   RING/U-box superfamily protein 
 bra-r.6   103850455   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 bra-r.6   103847429   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ghi-r.1   107899262   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ghi-r.1   107948346   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 gma-u.5   100810879   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 gma-u.5   100818800   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 vvi-u.5   104880042   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 ppo-u.5   7491963   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 mtr-u.5   25484071   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 sly-u.5   104644293   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 sot-r.1   102602984   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 
 sot-r.1   102584058   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 
 nta-r.1   107812673   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 
 nta-r.1   107825883   E3 ubiquitin-protein ligase SGR9, amyloplastic 
 nta-r.1   107792649   E3 ubiquitin-protein ligase SGR9, amyloplastic-like 

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Top 50 coexpressed genes to 102609490 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609490 (cit-r.1 coexpression data)

CoexMap"102609490"


citLOC102609490 | Entrez gene ID : 102609490    
Species cit ath bra ghi gma vvi ppo mtr sly sot nta osa bdi tae zma sbi hvu cre bna
Paralog 1 1 2 2 2 1 1 1 1 2 3 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (223 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (137 genes)  IEA  
Protein XP_006480539.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  chlo 1,  mito 1,  plas 1,  pero 1,  chlo_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_006480539.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006480539.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609490
ath-u.5
for
SGR9
bra-r.6
for
103850455
bra-r.6
for
103847429
ghi-r.1
for
107899262
ghi-r.1
for
107948346
gma-u.5
for
100810879
gma-u.5
for
100818800
vvi-u.5
for
104880042
ppo-u.5
for
7491963
mtr-u.5
for
25484071
sly-u.5
for
104644293
sot-r.1
for
102602984
sot-r.1
for
102584058
nta-r.1
for
107812673
nta-r.1
for
107825883
nta-r.1
for
107792649


Ortholog ID: 9108
Species cit ath bra bra ghi ghi gma gma vvi ppo mtr sly sot sot nta nta nta
Symbol LOC102609490 SGR9 LOC103850455 LOC103847429 LOC107899262 LOC107948346 LOC100810879 LOC100818800 LOC104880042 LOC7491963 LOC25484071 LOC104644293 LOC102602984 LOC102584058 LOC107812673 LOC107792649 LOC107781759
Function* E3 ubiquitin-protein ligase SGR9, amyloplastic RING/U-box superfamily protein E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like E3 ubiquitin-protein ligase SGR9, amyloplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609490 831806 103850455 103847429 107899262 107948346 100810879 100818800 104880042 7491963 25484071 104644293 102602984 102584058 107812673 107792649 107781759
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