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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7496541   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 ppo-u.5   7496541   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 ppo-r.4   7496541   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 gma-u.5   100798564   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 mtr-u.5   11426837   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 bra-r.6   103846590   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 vvi-u.5   100253986   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 ghi-r.1   107939434   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 ghi-r.1   107946192   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 bna-r.1   106372311   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 bna-r.1   111209977   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 cit-r.1   102630063   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 sly-u.5   101253485   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 sot-r.1   102603133   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 nta-r.1   107782236   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 nta-r.1   107825268   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 osa-u.5   4333215   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 zma-u.5   103629949   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 tae-r.2   123063073   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 tae-r.2   123071968   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 tae-r.2   123080274   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 hvu-r.1   123450175   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 sbi-r.1   8065549   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 bdi-r.1   100831827   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 

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Top 50 coexpressed genes to 7496541 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496541 (ppo-m.4 coexpression data)

CoexMap"7496541"


ppoLOC7496541 | Entrez gene ID : 7496541    
Species ppo gma mtr bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi ath cre
Paralog 3 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002304652.3 [sequence] [blastp]
XP_024452336.2 [sequence] [blastp]
XP_024452337.2 [sequence] [blastp]
XP_024452340.2 [sequence] [blastp]
XP_024452341.2 [sequence] [blastp]
XP_024452344.2 [sequence] [blastp]
XP_024452345.2 [sequence] [blastp]
XP_024452346.2 [sequence] [blastp]
XP_024452347.2 [sequence] [blastp]
XP_052307730.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_002304652.3)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452336.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452337.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452340.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452341.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452344.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452345.2)
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_024452346.2)
mito 5,  chlo_mito 4,  chlo 4,  cyto_mito 3  (predict for XP_024452347.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_052307730.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002304652.3)
mito 9  (predict for XP_024452336.2)
mito 9  (predict for XP_024452337.2)
mito 9  (predict for XP_024452340.2)
mito 9  (predict for XP_024452341.2)
mito 9  (predict for XP_024452344.2)
mito 9  (predict for XP_024452345.2)
mito 8  (predict for XP_024452346.2)
mito 9  (predict for XP_024452347.2)
mito 9  (predict for XP_052307730.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7496541
ppo-u.5
for
7496541
ppo-r.4
for
7496541
gma-u.5
for
100798564
mtr-u.5
for
11426837
bra-r.6
for
103846590
vvi-u.5
for
100253986
ghi-r.1
for
107939434
ghi-r.1
for
107946192
bna-r.1
for
106372311
bna-r.1
for
111209977
cit-r.1
for
102630063
sly-u.5
for
101253485
sot-r.1
for
102603133
nta-r.1
for
107782236
nta-r.1
for
107825268
osa-u.5
for
4333215
zma-u.5
for
103629949
tae-r.2
for
123063073
tae-r.2
for
123071968
tae-r.2
for
123080274
hvu-r.1
for
123450175
sbi-r.1
for
8065549
bdi-r.1
for
100831827


Ortholog ID: 9654
Species ppo gma mtr bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC7496541 LOC100798564 LOC11426837 LOC103846590 LOC100253986 LOC107939434 LOC107946192 LOC106372311 LOC111209977 LOC102630063 LOC101253485 LOC102603133 LOC107782236 LOC107825268 LOC4333215 LOC103629949 LOC123063073 LOC123182359 LOC123450175 LOC8065549 LOC100831827
Function* putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00650 Butanoate metabolism 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00650 Butanoate metabolism 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7496541 100798564 11426837 103846590 100253986 107939434 107946192 106372311 111209977 102630063 101253485 102603133 107782236 107825268 4333215 103629949 123063073 123182359 123450175 8065549 100831827
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