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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7496541   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 ppo-r.4   7496541   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 ppo-m.4   7496541   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 gma-u.5   100798564   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 mtr-u.5   11426837   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 vvi-u.5   100253986   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 sly-u.5   101253485   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 osa-u.5   4333215   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 
 zma-u.5   103629949   putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 

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Top 50 coexpressed genes to 7496541 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496541 (ppo-u.5 coexpression data)

CoexMap"7496541"


ppoLOC7496541 | Entrez gene ID : 7496541    
Species ppo gma mtr vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002304652.3 [sequence] [blastp]
XP_024452336.2 [sequence] [blastp]
XP_024452337.2 [sequence] [blastp]
XP_024452340.2 [sequence] [blastp]
XP_024452341.2 [sequence] [blastp]
XP_024452344.2 [sequence] [blastp]
XP_024452345.2 [sequence] [blastp]
XP_024452346.2 [sequence] [blastp]
XP_024452347.2 [sequence] [blastp]
XP_052307730.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_002304652.3)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452336.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452337.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452340.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452341.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452344.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_024452345.2)
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_024452346.2)
mito 5,  chlo_mito 4,  chlo 4,  cyto_mito 3  (predict for XP_024452347.2)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_052307730.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002304652.3)
mito 9  (predict for XP_024452336.2)
mito 9  (predict for XP_024452337.2)
mito 9  (predict for XP_024452340.2)
mito 9  (predict for XP_024452341.2)
mito 9  (predict for XP_024452344.2)
mito 9  (predict for XP_024452345.2)
mito 8  (predict for XP_024452346.2)
mito 9  (predict for XP_024452347.2)
mito 9  (predict for XP_052307730.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7496541

.
ppo-r.4
for
7496541

.
ppo-m.4
for
7496541

.
gma-u.5
for
100798564

.
mtr-u.5
for
11426837

.
vvi-u.5
for
100253986

.
sly-u.5
for
101253485

.
osa-u.5
for
4333215

.
zma-u.5
for
103629949

.


Ortholog ID: 9654
Species gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LOC100798564 LOC101253485 LOC4333215 LOC103629949 LOC103846590 LOC100253986 LOC7496541 LOC11426837 LOC123182359 LOC123063073 LOC123450175 LOC107939434 LOC107946192 LOC106372311 LOC111209977 LOC8065549 LOC102603133 LOC102630063 LOC100831827 LOC107782236 LOC107825268
Function* putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00650 Butanoate metabolism 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00650 Butanoate metabolism 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100798564 101253485 4333215 103629949 103846590 100253986 7496541 11426837 123182359 123063073 123450175 107939434 107946192 106372311 111209977 8065549 102603133 102630063 100831827 107782236 107825268
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