ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-r.4	18094841	DNA-directed RNA polymerase I subunit rpa49
ppo-u.5	18094841	DNA-directed RNA polymerase I subunit rpa49
gma-u.5	100812427	DNA-directed RNA polymerase I subunit rpa49
mtr-u.5	11441148	DNA-directed RNA polymerase I subunit rpa49
mtr-u.5	11433564	DNA-directed RNA polymerase I subunit rpa49
ath-u.5	AT3G13940	DNA binding / DNA-directed RNA polymerase
bra-r.6	103842476	DNA-directed RNA polymerase I subunit rpa49
vvi-u.5	100263424	uncharacterized LOC100263424
ghi-r.1	107939764	DNA-directed RNA polymerase I subunit rpa49
ghi-r.1	107950182	DNA-directed RNA polymerase I subunit rpa49
bna-r.1	106350895	DNA-directed RNA polymerase I subunit rpa49-like
bna-r.1	106377555	DNA-directed RNA polymerase I subunit rpa49
cit-r.1	102616137	hypothetical protein
sly-u.5	101267531	uncharacterized LOC101267531
sot-r.1	102603859	DNA-directed RNA polymerase I subunit rpa49
nta-r.1	107787017	uncharacterized LOC107787017
nta-r.1	107774854	uncharacterized LOC107774854
nta-r.1	107774396	rhodanese-like domain-containing protein 8, chloroplastic
osa-u.5	4350918	DNA-directed RNA polymerase I subunit rpa49
zma-u.5	100284469	uncharacterized LOC100284469
tae-r.2	123097274	DNA-directed RNA polymerase I subunit rpa49
tae-r.2	123092055	DNA-directed RNA polymerase I subunit rpa49
tae-r.2	123086023	DNA-directed RNA polymerase I subunit rpa49
hvu-r.1	123448414	DNA-directed RNA polymerase I subunit rpa49
sbi-r.1	8067921	uncharacterized LOC8067921
bdi-r.1	100835360	DNA-directed RNA polymerase I subunit rpa49
cre-r.1	CHLRE_01g070567v5	uncharacterized protein

Annotation

functional annotation

KEGG

pop03020 [list] [network] RNA polymerase (53 genes)

GO BP

GO:0006362 [list] [network] transcription elongation by RNA polymerase I	(1 genes)	IEA
GO:0001188 [list] [network] RNA polymerase I preinitiation complex assembly	(2 genes)	IEA
GO:0042790 [list] [network] nucleolar large rRNA transcription by RNA polymerase I	(2 genes)	IEA

GO CC

GO:0005736 [list] [network] RNA polymerase I complex

(17 genes)

IEA

GO MF

GO:0003677 [list] [network] DNA binding

(2205 genes)

IEA

Protein

XP_006369274.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3

(predict for XP_006369274.1)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for XP_006369274.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 18094841	ppo-u.5 for 18094841	gma-u.5 for 100812427	mtr-u.5 for 11441148	mtr-u.5 for 11433564	ath-u.5 for AT3G13940	bra-r.6 for 103842476	vvi-u.5 for 100263424	ghi-r.1 for 107939764	ghi-r.1 for 107950182	bna-r.1 for 106350895	bna-r.1 for 106377555	cit-r.1 for 102616137	sly-u.5 for 101267531	sot-r.1 for 102603859	nta-r.1 for 107787017	nta-r.1 for 107774854	nta-r.1 for 107774396	osa-u.5 for 4350918	zma-u.5 for 100284469	tae-r.2 for 123097274	tae-r.2 for 123092055	tae-r.2 for 123086023	hvu-r.1 for 123448414	sbi-r.1 for 8067921	bdi-r.1 for 100835360	cre-r.1 for CHLRE_01g070567v5

Ortholog

Ortholog ID: 8937

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*