ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-r.4	18098121	uncharacterized LOC18098121
ppo-u.5	18098121	uncharacterized LOC18098121
ppo-u.5	7460057	protein BIC1
gma-u.5	100793911	protein BIC1
gma-u.5	100792377	uncharacterized LOC100792377
gma-u.5	100779351	uncharacterized LOC100779351
mtr-u.5	25483821	protein BIC1
mtr-u.5	11433057	protein BIC1
ath-u.5	AT3G44450	uncharacterized protein
ath-u.5	AT3G52740	uncharacterized protein
bra-r.6	103872141	protein BIC1
bra-r.6	103873611	protein BIC2
bra-r.6	103841203	protein BIC1
vvi-u.5	104880149	protein BIC1
vvi-u.5	104881801	protein BIC1
vvi-u.5	100246831	protein BIC2
ghi-r.1	121227470	protein BIC1
ghi-r.1	107948136	protein BIC1
ghi-r.1	107943555	protein BIC2
bna-r.1	BNAA09G33150D	protein BIC1
bna-r.1	BNAC08G23940D	protein BIC1
cit-r.1	102625741	protein BIC1
cit-r.1	102609694	uncharacterized LOC102609694
nta-r.1	107775676	uncharacterized LOC107775676
nta-r.1	107779912	uncharacterized LOC107779912
osa-u.5	4329552	uncharacterized LOC4329552
osa-u.5	4335778	uncharacterized LOC4335778
zma-u.5	100274851	uncharacterized LOC100274851
zma-u.5	100275550	uncharacterized LOC100275550
tae-r.2	123185463	protein BIC1
tae-r.2	123049367	protein BIC1
tae-r.2	123041376	protein BIC1
hvu-r.1	123430254	protein BIC1-like
sbi-r.1	8059628	protein BIC1
sbi-r.1	8072965	uncharacterized LOC8072965
bdi-r.1	100845821	protein BIC2
bdi-r.1	100823432	protein BIC1

Annotation

functional annotation

KEGG

GO BP

GO:0009785 [list] [network] blue light signaling pathway

(6 genes)

IEA

GO CC

GO MF

Protein

XP_006384813.3 [sequence] [blastp]
XP_006384814.2 [sequence] [blastp]
XP_024454952.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 5, cyto 1	(predict for XP_006384813.3)
nucl 7, cyto_nucl 4, cyto 1	(predict for XP_006384814.2)
nucl 9, cyto 1	(predict for XP_024454952.2)

Subcellular
localization
TargetP

other 4, mito 3	(predict for XP_006384813.3)
other 4, mito 3	(predict for XP_006384814.2)
other 8	(predict for XP_024454952.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 18098121	ppo-u.5 for 18098121	ppo-u.5 for 7460057	gma-u.5 for 100793911	gma-u.5 for 100792377	gma-u.5 for 100779351	mtr-u.5 for 25483821	mtr-u.5 for 11433057	ath-u.5 for AT3G44450	ath-u.5 for AT3G52740	bra-r.6 for 103872141	bra-r.6 for 103873611	bra-r.6 for 103841203	vvi-u.5 for 104880149	vvi-u.5 for 104881801	vvi-u.5 for 100246831	ghi-r.1 for 121227470	ghi-r.1 for 107948136	ghi-r.1 for 107943555	bna-r.1 for BNAA09G33150D	bna-r.1 for BNAC08G23940D	cit-r.1 for 102625741	cit-r.1 for 102609694	nta-r.1 for 107775676	nta-r.1 for 107779912	osa-u.5 for 4329552	osa-u.5 for 4335778	zma-u.5 for 100274851	zma-u.5 for 100275550	tae-r.2 for 123185463	tae-r.2 for 123049367	tae-r.2 for 123041376	hvu-r.1 for 123430254	sbi-r.1 for 8059628	sbi-r.1 for 8072965	bdi-r.1 for 100845821	bdi-r.1 for 100823432

Ortholog

Ortholog ID: 3939

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC18098121

protein BIC1

uncharacterized LOC100792377

protein BIC1

uncharacterized protein

protein BIC1

protein BIC2

protein BIC1

protein BIC2

protein BIC1

protein BIC2

protein BIC1

uncharacterized LOC102609694

uncharacterized LOC107775676

uncharacterized LOC107779912

uncharacterized LOC4329552

uncharacterized LOC4335778

uncharacterized LOC100274851

uncharacterized LOC100275550

protein BIC1

protein BIC1-like

protein BIC1

uncharacterized LOC8072965

protein BIC2

protein BIC1

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	3
ath00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi04712	Circadian rhythm - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi04712	Circadian rhythm - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	2
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00220	Arginine biosynthesis	4
ghi00250	Alanine, aspartate and glutamate metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00910	Nitrogen metabolism	4
ghi01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	3
ghi04120	Ubiquitin mediated proteolysis	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3
tae04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

18098121

7460057

100793911

100792377

100815684

25483821

11433057

823570

824440

103872141

103873611

103841203

104880149

104881801

100246831

107928164

107899228

107959363

106364865

102625741

102609694

107775676

107779912

4329552

4335778

100274851

100275550

123185463

123049367

123041376

123430254

8059628

8072965

100845821

100823432

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18098121 (ppo-r.4 coexpression data)

Top 50 enrichment test to 18098121 (ppo-r.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	nta	osa	zma	tae	hvu	sbi	bdi	cre	sot	sly
Paralog	3	3	2	2	3	3	3	2	2	2	2	2	3	1	2	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18098121 (ppo-r.4 coexpression data)

Top 50 enrichment test to 18098121 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**