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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7460057   protein BIC1 
 ppo-r.4   7460057   protein BIC1 
 ppo-u.5   18098121   uncharacterized LOC18098121 
 gma-u.5   100793911   protein BIC1 
 gma-u.5   100792377   uncharacterized LOC100792377 
 gma-u.5   100779351   uncharacterized LOC100779351 
 mtr-u.5   25483821   protein BIC1 
 mtr-u.5   11433057   protein BIC1 
 ath-u.5   AT3G44450   uncharacterized protein 
 ath-u.5   AT3G52740   uncharacterized protein 
 vvi-u.5   104880149   protein BIC1 
 vvi-u.5   104881801   protein BIC1 
 vvi-u.5   100246831   protein BIC2 
 osa-u.5   4329552   uncharacterized LOC4329552 
 osa-u.5   4335778   uncharacterized LOC4335778 
 zma-u.5   100274851   uncharacterized LOC100274851 
 zma-u.5   100275550   uncharacterized LOC100275550 

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Top 50 coexpressed genes to 7460057 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7460057 (ppo-u.5 coexpression data)

CoexMap"7460057"


ppoLOC7460057 | Entrez gene ID : 7460057    
Species ppo gma mtr ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 2 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009785 [list] [network] blue light signaling pathway  (6 genes)  IEA  
GO CC
GO MF
Protein XP_002312817.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002312817.2)
Subcellular
localization
TargetP
chlo 9,  other 4  (predict for XP_002312817.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7460057

.
ppo-r.4
for
7460057

.
ppo-u.5
for
18098121

.
gma-u.5
for
100793911

.
gma-u.5
for
100792377

.
gma-u.5
for
100779351

.
mtr-u.5
for
25483821

.
mtr-u.5
for
11433057

.
ath-u.5
for
AT3G44450

.
ath-u.5
for
AT3G52740

.
vvi-u.5
for
104880149

.
vvi-u.5
for
104881801

.
vvi-u.5
for
100246831

.
osa-u.5
for
4329552

.
osa-u.5
for
4335778

.
zma-u.5
for
100274851

.
zma-u.5
for
100275550

.


Ortholog ID: 3939
Species ath ath gma gma osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi sbi sbi cit cit bdi bdi nta nta
Symbol AT3G44450 AT3G52740 LOC100793911 LOC100792377 LOC4329552 LOC4335778 LOC100275550 LOC100274851 LOC103873611 LOC103872141 LOC104880149 LOC100246831 LOC18098121 LOC7460057 LOC25483821 LOC11433057 LOC123185463 LOC123041376 LOC123430254 LOC107959363 LOC107899228 LOC8072965 LOC8059628 LOC102609694 LOC102625741 LOC100823432 LOC100845821 LOC107779912 LOC107775676
Function* uncharacterized protein uncharacterized protein protein BIC1 uncharacterized LOC100792377 uncharacterized LOC4329552 uncharacterized LOC4335778 uncharacterized LOC100275550 uncharacterized LOC100274851 protein BIC2 protein BIC1 protein BIC1 protein BIC2 uncharacterized LOC18098121 protein BIC1 protein BIC1 protein BIC1 protein BIC1 protein BIC1 protein BIC1-like protein BIC2 protein BIC1 uncharacterized LOC8072965 protein BIC1 uncharacterized LOC102609694 protein BIC1 protein BIC1 protein BIC2 uncharacterized LOC107779912 uncharacterized LOC107775676
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04712 Circadian rhythm - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00910 Nitrogen metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823570 824440 100793911 100792377 4329552 4335778 100275550 100274851 103873611 103872141 104880149 100246831 18098121 7460057 25483821 11433057 123185463 123041376 123430254 107959363 107899228 8072965 8059628 102609694 102625741 100823432 100845821 107779912 107775676
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