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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   18107590   pentatricopeptide repeat-containing protein At5g24830 
 ppo-u.5   18107590   pentatricopeptide repeat-containing protein At5g24830 
 gma-u.5   100786895   pentatricopeptide repeat-containing protein At5g24830 
 mtr-u.5   25481890   pentatricopeptide repeat-containing protein At5g24830 
 ath-u.5   AT5G24830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103874348   pentatricopeptide repeat-containing protein At5g24830 
 vvi-u.5   100853091   pentatricopeptide repeat-containing protein At5g24830 
 bna-r.1   106380819   pentatricopeptide repeat-containing protein At5g24830 
 bna-r.1   106348496   pentatricopeptide repeat-containing protein At5g24830-like 
 cit-r.1   102615245   pentatricopeptide repeat-containing protein At5g24830 
 sly-u.5   101263303   pentatricopeptide repeat-containing protein At5g24830 
 sot-r.1   102587223   pentatricopeptide repeat-containing protein At5g24830 
 nta-r.1   107809569   uncharacterized LOC107809569 
 nta-r.1   107818250   uncharacterized LOC107818250 

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Top 50 coexpressed genes to 18107590 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18107590 (ppo-r.4 coexpression data)

CoexMap"18107590"


ppoLOC18107590 | Entrez gene ID : 18107590    
Species ppo gma mtr ath bra vvi bna cit sly sot nta sbi osa tae hvu ghi zma cre bdi
Paralog 2 1 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024445433.1 [sequence] [blastp]
XP_024445434.1 [sequence] [blastp]
XP_024445435.1 [sequence] [blastp]
XP_052305048.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024445433.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024445434.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024445435.1)
cyto 8,  vacu 1,  cysk 1,  golg 1  (predict for XP_052305048.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_024445433.1)
other 4,  chlo 3  (predict for XP_024445434.1)
other 4,  chlo 3  (predict for XP_024445435.1)
other 9  (predict for XP_052305048.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
18107590
ppo-u.5
for
18107590
gma-u.5
for
100786895
mtr-u.5
for
25481890
ath-u.5
for
AT5G24830
bra-r.6
for
103874348
vvi-u.5
for
100853091
bna-r.1
for
106380819
bna-r.1
for
106348496
cit-r.1
for
102615245
sly-u.5
for
101263303
sot-r.1
for
102587223
nta-r.1
for
107809569
nta-r.1
for
107818250


Ortholog ID: 14049
Species ppo gma mtr ath bra vvi bna bna cit sly sot nta nta
Symbol LOC18107590 LOC100786895 LOC25481890 AT5G24830 LOC103874348 LOC100853091 LOC106380819 LOC106348496 LOC102615245 LOC101263303 LOC102587223 LOC107809569 LOC107818250
Function* pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830-like pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830 pentatricopeptide repeat-containing protein At5g24830 uncharacterized LOC107809569 uncharacterized LOC107818250
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18107590 100786895 25481890 832552 103874348 100853091 106380819 106348496 102615245 101263303 102587223 107809569 107818250
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