ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	7461997	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
ppo-u.5	7461997	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
ppo-m.4	7461997	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
gma-u.5	100793742	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
mtr-u.5	25493605	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
ath-u.5	AT4G16835	Tetratricopeptide repeat (TPR)-like superfamily protein
vvi-u.5	100243298	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
ghi-r.1	107939710	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
ghi-r.1	107929396	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
bna-r.1	106375894	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
cit-r.1	102608906	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
sly-u.5	101254512	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
sot-r.1	102596816	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
nta-r.1	107801021	pentatricopeptide repeat-containing protein At4g16835, mitochondrial-like
nta-r.1	107823281	pentatricopeptide repeat-containing protein At4g16835, mitochondrial-like
osa-u.5	9268660	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
zma-u.5	103627674	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
sbi-r.1	8071755	pentatricopeptide repeat-containing protein At4g16835, mitochondrial
bdi-r.1	100832779	pentatricopeptide repeat-containing protein At4g16835, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(384 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(777 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1480 genes)	IEA
GO:0005515 [list] [network] protein binding	(4916 genes)	IEA

Protein

XP_002303374.3 [sequence] [blastp]
XP_024453476.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 3, nucl 1, E.R. 1	(predict for XP_002303374.3)
chlo 6, mito 3, nucl 1, E.R. 1	(predict for XP_024453476.1)

Subcellular
localization
TargetP

chlo 3	(predict for XP_002303374.3)
chlo 3	(predict for XP_024453476.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7461997	ppo-u.5 for 7461997	ppo-m.4 for 7461997	gma-u.5 for 100793742	mtr-u.5 for 25493605	ath-u.5 for AT4G16835	vvi-u.5 for 100243298	ghi-r.1 for 107939710	ghi-r.1 for 107929396	bna-r.1 for 106375894	cit-r.1 for 102608906	sly-u.5 for 101254512	sot-r.1 for 102596816	nta-r.1 for 107801021	nta-r.1 for 107823281	osa-u.5 for 9268660	zma-u.5 for 103627674	sbi-r.1 for 8071755	bdi-r.1 for 100832779