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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7461997  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 ppo-r.4  7461997  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 ppo-m.4  7461997  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 gma-u.5  100793742  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 mtr-u.5  25493605  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 ath-u.5  AT4G16835  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  100243298  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 sly-u.5  101254512  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 osa-u.5  9268660  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 
 zma-u.5  103627674  pentatricopeptide repeat-containing protein At4g16835, mitochondrial 

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Top 50 coexpressed genes to 7461997 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461997 (ppo-u.5 coexpression data)

CoexMap"7461997"


ppoLOC7461997 | Entrez gene ID : 7461997
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002303374.3 [sequence] [blastp]
XP_024453476.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  E.R. 1  (predict for XP_002303374.3)
chlo 6,  mito 3,  nucl 1,  E.R. 1  (predict for XP_024453476.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002303374.3)
chlo 3  (predict for XP_024453476.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7461997

.

ppo-r.4
for
7461997

.

ppo-m.4
for
7461997

.

gma-u.5
for
100793742

.

mtr-u.5
for
25493605

.

ath-u.5
for
AT4G16835

.

vvi-u.5
for
100243298

.

sly-u.5
for
101254512

.

osa-u.5
for
9268660

.

zma-u.5
for
103627674

.


Ortholog ID: 10191
Species ath gma sly osa zma vvi ppo mtr ghi ghi sbi sot cit bdi nta nta
Symbol AT4G16835 LOC100793742 LOC101254512 LOC9268660 LOC103627674 LOC100243298 LOC7461997 LOC25493605 LOC107929396 LOC107939710 LOC8071755 LOC102596816 LOC102608906 LOC100832779 LOC107823281 LOC107801021
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial pentatricopeptide repeat-containing protein At4g16835, mitochondrial-like pentatricopeptide repeat-containing protein At4g16835, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827390 100793742 101254512 9268660 103627674 100243298 7461997 25493605 107929396 107939710 8071755 102596816 102608906 100832779 107823281 107801021
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