ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	7463591	uncharacterized LOC7463591
ppo-u.5	7463591	uncharacterized LOC7463591
ppo-m.4	7463591	uncharacterized LOC7463591
ppo-u.5	7491893	uncharacterized LOC7491893
ppo-u.5	7463592	uncharacterized LOC7463592
ppo-u.5	7456409	uncharacterized LOC7456409
gma-u.5	100809246	transmembrane protein 45A
gma-u.5	100811854	transmembrane protein 45A
gma-u.5	100813776	transmembrane protein 45A
mtr-u.5	11407665	transmembrane protein 45B
mtr-u.5	11416941	transmembrane protein 45B
mtr-u.5	11441884	transmembrane protein 45B
ath-u.5	AT1G49470	transmembrane epididymal protein (DUF716)
bra-r.6	103868903	transmembrane protein 45B
vvi-u.5	100262067	uncharacterized LOC100262067
ghi-r.1	107938841	transmembrane protein 45A
ghi-r.1	107938360	transmembrane protein 45A
ghi-r.1	107929461	transmembrane protein 45A
bna-r.1	106439073	transmembrane protein 45B-like
bna-r.1	125588851	transmembrane protein 45A-like
bna-r.1	125587837	transmembrane protein 45B-like
cit-r.1	102624193	hypothetical protein
cit-r.1	102612249	uncharacterized LOC102612249
sly-u.5	101248128	uncharacterized LOC101248128
sly-u.5	101251133	uncharacterized LOC101251133
sly-u.5	101255720	uncharacterized LOC101255720
sot-r.1	102579654	transmembrane protein 45A-like
sot-r.1	102600392	transmembrane protein 45A
sot-r.1	102586016	transmembrane protein 45B-like
nta-r.1	107797736	uncharacterized LOC107797736
nta-r.1	107790791	uncharacterized LOC107790791
nta-r.1	107786533	uncharacterized LOC107786533
osa-u.5	4347195	uncharacterized LOC4347195
osa-u.5	4347194	uncharacterized LOC4347194
osa-u.5	4345775	uncharacterized LOC4345775
zma-u.5	100285697	uncharacterized LOC100285697
zma-u.5	100191315	uncharacterized LOC100191315
tae-r.2	123186115	transmembrane protein 45A
tae-r.2	123050067	transmembrane protein 45A
hvu-r.1	123430212	uncharacterized LOC123430212
sbi-r.1	8062757	transmembrane protein 45B
sbi-r.1	8071398	transmembrane protein 45A
sbi-r.1	8081012	uncharacterized LOC8081012
bdi-r.1	100826875	transmembrane protein 45A
cre-r.1	CHLRE_06g283900v5	uncharacterized protein
cre-r.1	CHLRE_06g299350v5	uncharacterized protein

Top 50 coexpressed genes to 7463591 (ppo-r.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7463591 (ppo-r.4 coexpression data)

CoexMap"7463591"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002304873.3 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 3, E.R. 1, chlo_mito 1

(predict for XP_002304873.3)

Subcellular
localization
TargetP

scret 5

(predict for XP_002304873.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7463591	ppo-u.5 for 7463591	ppo-m.4 for 7463591	ppo-u.5 for 7491893	ppo-u.5 for 7463592	ppo-u.5 for 7456409	gma-u.5 for 100809246	gma-u.5 for 100811854	gma-u.5 for 100813776	mtr-u.5 for 11407665	mtr-u.5 for 11416941	mtr-u.5 for 11441884	ath-u.5 for AT1G49470	bra-r.6 for 103868903	vvi-u.5 for 100262067	ghi-r.1 for 107938841	ghi-r.1 for 107938360	ghi-r.1 for 107929461	bna-r.1 for 106439073	bna-r.1 for 125588851	bna-r.1 for 125587837	cit-r.1 for 102624193	cit-r.1 for 102612249	sly-u.5 for 101248128	sly-u.5 for 101251133	sly-u.5 for 101255720	sot-r.1 for 102579654	sot-r.1 for 102600392	sot-r.1 for 102586016	nta-r.1 for 107797736	nta-r.1 for 107790791	nta-r.1 for 107786533	osa-u.5 for 4347195	osa-u.5 for 4347194	osa-u.5 for 4345775	zma-u.5 for 100285697	zma-u.5 for 100191315	tae-r.2 for 123186115	tae-r.2 for 123050067	hvu-r.1 for 123430212	sbi-r.1 for 8062757	sbi-r.1 for 8071398	sbi-r.1 for 8081012	bdi-r.1 for 100826875	cre-r.1 for CHLRE_06g283900v5	cre-r.1 for CHLRE_06g299350v5

Ortholog

Ortholog ID: 444

Species

ppo

gma

mtr

ath

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7491893

uncharacterized LOC7456409

uncharacterized LOC18094084

transmembrane protein 45A

transmembrane protein 45B

uncharacterized LOC25485582

transmembrane epididymal protein (DUF716)

plant viral-response family protein

uncharacterized LOC100245283

uncharacterized LOC100255325

transmembrane protein 45A

transmembrane protein 45B

transmembrane protein 45A

transmembrane protein 45B-like

uncharacterized LOC102612249

uncharacterized LOC102619991

uncharacterized LOC101255720

uncharacterized LOC101260335

uncharacterized LOC101265158

transmembrane protein 45A-like

transmembrane protein 45B-like

transmembrane protein 45A

uncharacterized LOC107786533

uncharacterized LOC107783214

uncharacterized LOC4347195

uncharacterized LOC4347194

uncharacterized LOC100285697

uncharacterized LOC100191315

Plant viral-response family protein-like

transmembrane protein 45A

uncharacterized LOC123430212

transmembrane protein 45B

transmembrane protein 45A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	4
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00514	Other types of O-glycan biosynthesis	4
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00051	Fructose and mannose metabolism	2
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00910	Nitrogen metabolism	2
vvi01310	Nitrogen cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00460	Cyanoamino acid metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	3
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2
sot00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	3
nta03015	mRNA surveillance pathway	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	3
zma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3
tae00250	Alanine, aspartate and glutamate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	3
bdi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

7491893

7456409

18094084

100809246

100808451

100807467

11407665

25485582

841370

28717288

100245283

100255325

107938841

107900672

107914273

125587719

111200270

111200273

102612249

102619991

101255720

101260335

101265158

102579654

102586016

102584913

107786533

107783214

4347195

4347194

100285697

100191315

100272958

123072292

123063312

123430212

8062757

8079131

100826875

100829430

5720969

5716997

The preparation time of this page was 0.3 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	3	1	1	1	3	3	2	3	3	3	3	2	2	1	3	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7463591 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7463591 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**