ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107929461	transmembrane protein 45A
ghi-r.1	107938360	transmembrane protein 45A
ghi-r.1	107938841	transmembrane protein 45A
ghi-r.1	107925565	transmembrane protein 45A
ath-u.5	AT1G49470	transmembrane epididymal protein (DUF716)
bra-r.6	103832942	transmembrane protein 45B
bna-r.1	125588851	transmembrane protein 45A-like
bna-r.1	125587837	transmembrane protein 45B-like
bna-r.1	125587719	transmembrane protein 45B-like
cit-r.1	102624193	hypothetical protein
cit-r.1	102619991	uncharacterized LOC102619991
gma-u.5	100809246	transmembrane protein 45A
gma-u.5	100811854	transmembrane protein 45A
gma-u.5	100813776	transmembrane protein 45A
vvi-u.5	100262067	uncharacterized LOC100262067
ppo-u.5	7491893	uncharacterized LOC7491893
ppo-u.5	7463592	uncharacterized LOC7463592
ppo-u.5	7463591	uncharacterized LOC7463591
mtr-u.5	11407665	transmembrane protein 45B
mtr-u.5	11416941	transmembrane protein 45B
sly-u.5	101248128	uncharacterized LOC101248128
sly-u.5	101251133	uncharacterized LOC101251133
sly-u.5	101255720	uncharacterized LOC101255720
sot-r.1	102600392	transmembrane protein 45A
sot-r.1	102579654	transmembrane protein 45A-like
sot-r.1	102584913	transmembrane protein 45A
nta-r.1	107790791	uncharacterized LOC107790791
nta-r.1	107797736	uncharacterized LOC107797736
nta-r.1	107786533	uncharacterized LOC107786533
osa-u.5	4345775	uncharacterized LOC4345775
osa-u.5	4347194	uncharacterized LOC4347194
zma-u.5	100272958	Plant viral-response family protein-like
zma-u.5	100280959	plant viral-response family protein
tae-r.2	123186115	transmembrane protein 45A
hvu-r.1	123445385	transmembrane protein 45A
hvu-r.1	123397502	uncharacterized LOC123397502
sbi-r.1	8081012	uncharacterized LOC8081012
bdi-r.1	100826875	transmembrane protein 45A
cre-r.1	CHLRE_06g299350v5	uncharacterized protein
cre-r.1	CHLRE_06g283900v5	uncharacterized protein

Top 50 coexpressed genes to 107929461 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107929461 (ghi-r.1 coexpression data)

CoexMap"107929461"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016716379.1 [sequence] [blastp]
XP_040930341.1 [sequence] [blastp]
XP_040930342.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, chlo 1, E.R. 1, golg 1	(predict for XP_016716379.1)
plas 5, chlo 1, E.R. 1, golg 1	(predict for XP_040930341.1)
plas 5, chlo 1, E.R. 1, golg 1	(predict for XP_040930342.1)

Subcellular
localization
TargetP

scret 3	(predict for XP_016716379.1)
scret 3	(predict for XP_040930341.1)
scret 3	(predict for XP_040930342.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107929461	ghi-r.1 for 107938360	ghi-r.1 for 107938841	ghi-r.1 for 107925565	ath-u.5 for AT1G49470	bra-r.6 for 103832942	bna-r.1 for 125588851	bna-r.1 for 125587837	bna-r.1 for 125587719	cit-r.1 for 102624193	cit-r.1 for 102619991	gma-u.5 for 100809246	gma-u.5 for 100811854	gma-u.5 for 100813776	vvi-u.5 for 100262067	ppo-u.5 for 7491893	ppo-u.5 for 7463592	ppo-u.5 for 7463591	mtr-u.5 for 11407665	mtr-u.5 for 11416941	sly-u.5 for 101248128	sly-u.5 for 101251133	sly-u.5 for 101255720	sot-r.1 for 102600392	sot-r.1 for 102579654	sot-r.1 for 102584913	nta-r.1 for 107790791	nta-r.1 for 107797736	nta-r.1 for 107786533	osa-u.5 for 4345775	osa-u.5 for 4347194	zma-u.5 for 100272958	zma-u.5 for 100280959	tae-r.2 for 123186115	hvu-r.1 for 123445385	hvu-r.1 for 123397502	sbi-r.1 for 8081012	bdi-r.1 for 100826875	cre-r.1 for CHLRE_06g299350v5	cre-r.1 for CHLRE_06g283900v5

Ortholog

Ortholog ID: 444

Species

ghi

ath

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

transmembrane protein 45A

transmembrane protein 45B

transmembrane epididymal protein (DUF716)

plant viral-response family protein

transmembrane protein 45B-like

uncharacterized LOC102619991

uncharacterized LOC102612249

transmembrane protein 45A

transmembrane protein 45B

uncharacterized LOC100255325

uncharacterized LOC100245283

uncharacterized LOC7491893

uncharacterized LOC7456409

uncharacterized LOC18094084

transmembrane protein 45B

uncharacterized LOC25485582

uncharacterized LOC101255720

uncharacterized LOC101260335

uncharacterized LOC101265158

transmembrane protein 45A-like

transmembrane protein 45A

transmembrane protein 45B-like

uncharacterized LOC107786533

uncharacterized LOC107783214

uncharacterized LOC4347194

uncharacterized LOC4347195

Plant viral-response family protein-like

uncharacterized LOC100285697

uncharacterized LOC100191315

transmembrane protein 45A

uncharacterized LOC123430212

transmembrane protein 45A

transmembrane protein 45B

transmembrane protein 45A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00460	Cyanoamino acid metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00514	Other types of O-glycan biosynthesis	4
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00910	Nitrogen metabolism	2
vvi01310	Nitrogen cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	4
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00051	Fructose and mannose metabolism	2
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	3
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2
sot00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	3
nta03015	mRNA surveillance pathway	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	3
zma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3
tae00250	Alanine, aspartate and glutamate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	3
bdi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

107938841

107914273

107900672

841370

28717288

125587719

111200270

111200273

102619991

102612249

100809246

100807467

100808451

100255325

100245283

7491893

7456409

18094084

11407665

25485582

101255720

101260335

101265158

102579654

102584913

102586016

107786533

107783214

4347194

4347195

100272958

100285697

100191315

123072292

123063312

123430212

8079131

8062757

100826875

100829430

5716997

5720969

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	3	2	3	1	3	2	3	3	3	2	2	1	2	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107929461 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107929461 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**