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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7463892   pentatricopeptide repeat-containing protein At5g01110 
 ppo-u.5   7463892   pentatricopeptide repeat-containing protein At5g01110 
 gma-u.5   100816677   pentatricopeptide repeat-containing protein At5g01110 
 mtr-u.5   25494937   uncharacterized LOC25494937 
 mtr-u.5   11429943   pentatricopeptide repeat-containing protein At5g01110 
 ath-u.5   AT5G01110   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   117131527   pentatricopeptide repeat-containing protein At5g01110 
 bra-r.6   103855434   pentatricopeptide repeat-containing protein At5g01110 
 vvi-u.5   100244765   pentatricopeptide repeat-containing protein At5g01110 
 ghi-r.1   107953177   pentatricopeptide repeat-containing protein At5g01110 
 ghi-r.1   107954324   pentatricopeptide repeat-containing protein At5g01110 
 bna-r.1   106426873   pentatricopeptide repeat-containing protein At5g01110-like 
 bna-r.1   106427419   pentatricopeptide repeat-containing protein At5g01110-like 
 cit-r.1   102616749   pentatricopeptide repeat-containing protein At5g01110 
 sly-u.5   101246240   pentatricopeptide repeat-containing protein 
 sot-r.1   102603102   pentatricopeptide repeat-containing protein At5g01110-like 
 nta-r.1   107812711   uncharacterized LOC107812711 
 nta-r.1   107776524   uncharacterized LOC107776524 
 osa-u.5   4331727   pentatricopeptide repeat-containing protein At5g01110 
 zma-u.5   103631761   pentatricopeptide repeat-containing protein 
 tae-r.2   123084824   pentatricopeptide repeat-containing protein At5g01110 
 tae-r.2   123093259   pentatricopeptide repeat-containing protein At5g01110 
 tae-r.2   123098525   pentatricopeptide repeat-containing protein At5g01110 
 hvu-r.1   123449525   pentatricopeptide repeat-containing protein At5g01110-like 
 sbi-r.1   8059842   pentatricopeptide repeat-containing protein At5g01110 
 bdi-r.1   100833520   pentatricopeptide repeat-containing protein At5g01110 

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Top 50 coexpressed genes to 7463892 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463892 (ppo-r.4 coexpression data)

CoexMap"7463892"


ppoLOC7463892 | Entrez gene ID : 7463892    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 2 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024448997.2 [sequence] [blastp]
XP_024449018.2 [sequence] [blastp]
XP_024449032.2 [sequence] [blastp]
XP_024449044.2 [sequence] [blastp]
XP_024449071.2 [sequence] [blastp]
XP_024449081.2 [sequence] [blastp]
XP_024449087.2 [sequence] [blastp]
XP_024449095.2 [sequence] [blastp]
XP_024449103.2 [sequence] [blastp]
XP_052303075.1 [sequence] [blastp]
XP_052303077.1 [sequence] [blastp]
XP_052303079.1 [sequence] [blastp]
XP_052303080.1 [sequence] [blastp]
XP_052303082.1 [sequence] [blastp]
XP_052303086.1 [sequence] [blastp]
XP_052303087.1 [sequence] [blastp]
XP_052303090.1 [sequence] [blastp]
XP_052303096.1 [sequence] [blastp]
XP_052303104.1 [sequence] [blastp]
XP_052303105.1 [sequence] [blastp]
XP_052303106.1 [sequence] [blastp]
XP_052303109.1 [sequence] [blastp]
XP_052303112.1 [sequence] [blastp]
XP_052303113.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024448997.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449018.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449032.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449044.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449071.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449081.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449087.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449095.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_024449103.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303075.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303077.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303079.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303080.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303082.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303086.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303087.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303090.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303096.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303104.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303105.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303106.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303109.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303112.1)
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_052303113.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_024448997.2)
mito 6,  other 4  (predict for XP_024449018.2)
mito 6,  other 4  (predict for XP_024449032.2)
mito 6,  other 4  (predict for XP_024449044.2)
mito 6,  other 4  (predict for XP_024449071.2)
mito 6,  other 4  (predict for XP_024449081.2)
mito 6,  other 4  (predict for XP_024449087.2)
mito 6,  other 4  (predict for XP_024449095.2)
mito 6,  other 4  (predict for XP_024449103.2)
mito 6,  other 4  (predict for XP_052303075.1)
mito 6,  other 4  (predict for XP_052303077.1)
mito 6,  other 4  (predict for XP_052303079.1)
mito 6,  other 4  (predict for XP_052303080.1)
mito 6,  other 4  (predict for XP_052303082.1)
mito 6,  other 4  (predict for XP_052303086.1)
mito 6,  other 4  (predict for XP_052303087.1)
mito 6,  other 4  (predict for XP_052303090.1)
mito 6,  other 4  (predict for XP_052303096.1)
mito 6,  other 4  (predict for XP_052303104.1)
mito 6,  other 4  (predict for XP_052303105.1)
mito 6,  other 4  (predict for XP_052303106.1)
mito 6,  other 4  (predict for XP_052303109.1)
mito 6,  other 4  (predict for XP_052303112.1)
mito 6,  other 4  (predict for XP_052303113.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7463892
ppo-u.5
for
7463892
gma-u.5
for
100816677
mtr-u.5
for
25494937
mtr-u.5
for
11429943
ath-u.5
for
AT5G01110
bra-r.6
for
117131527
bra-r.6
for
103855434
vvi-u.5
for
100244765
ghi-r.1
for
107953177
ghi-r.1
for
107954324
bna-r.1
for
106426873
bna-r.1
for
106427419
cit-r.1
for
102616749
sly-u.5
for
101246240
sot-r.1
for
102603102
nta-r.1
for
107812711
nta-r.1
for
107776524
osa-u.5
for
4331727
zma-u.5
for
103631761
tae-r.2
for
123084824
tae-r.2
for
123093259
tae-r.2
for
123098525
hvu-r.1
for
123449525
sbi-r.1
for
8059842
bdi-r.1
for
100833520


Ortholog ID: 10309
Species ppo gma mtr mtr ath bra bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC7463892 LOC100816677 LOC25494937 LOC11429943 AT5G01110 LOC117131527 LOC103855434 LOC100244765 LOC107953177 LOC107954324 LOC106426873 LOC106427419 LOC102616749 LOC101246240 LOC102603102 LOC107812711 LOC107776524 LOC4331727 LOC103631761 LOC123084824 LOC123093259 LOC123098525 LOC123449525 LOC8059842 LOC100833520
Function* pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 uncharacterized LOC25494937 pentatricopeptide repeat-containing protein At5g01110 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110-like pentatricopeptide repeat-containing protein At5g01110-like pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g01110-like uncharacterized LOC107812711 uncharacterized LOC107776524 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110-like pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7463892 100816677 25494937 11429943 831824 117131527 103855434 100244765 107953177 107954324 106426873 106427419 102616749 101246240 102603102 107812711 107776524 4331727 103631761 123084824 123093259 123098525 123449525 8059842 100833520
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