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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107954324  pentatricopeptide repeat-containing protein At5g01110 
 ghi-r.1  107953177  pentatricopeptide repeat-containing protein At5g01110 
 ath-u.5  AT5G01110  Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6  117131527  pentatricopeptide repeat-containing protein At5g01110 
 bra-r.6  103855434  pentatricopeptide repeat-containing protein At5g01110 
 bna-r.1  106427419  pentatricopeptide repeat-containing protein At5g01110-like 
 bna-r.1  106426873  pentatricopeptide repeat-containing protein At5g01110-like 
 cit-r.1  102616749  pentatricopeptide repeat-containing protein At5g01110 
 gma-u.5  100816677  pentatricopeptide repeat-containing protein At5g01110 
 vvi-u.5  100244765  pentatricopeptide repeat-containing protein At5g01110 
 ppo-u.5  7463892  pentatricopeptide repeat-containing protein At5g01110 
 mtr-u.5  25494937  uncharacterized LOC25494937 
 mtr-u.5  11429943  pentatricopeptide repeat-containing protein At5g01110 
 sly-u.5  101246240  pentatricopeptide repeat-containing protein 
 sot-r.1  102603102  pentatricopeptide repeat-containing protein At5g01110-like 
 nta-r.1  107776524  uncharacterized LOC107776524 
 nta-r.1  107812711  uncharacterized LOC107812711 
 osa-u.5  4331727  pentatricopeptide repeat-containing protein At5g01110 
 zma-u.5  103631761  pentatricopeptide repeat-containing protein 
 tae-r.2  123098525  pentatricopeptide repeat-containing protein At5g01110 
 tae-r.2  123093259  pentatricopeptide repeat-containing protein At5g01110 
 tae-r.2  123084824  pentatricopeptide repeat-containing protein At5g01110 
 hvu-r.1  123449525  pentatricopeptide repeat-containing protein At5g01110-like 
 sbi-r.1  8059842  pentatricopeptide repeat-containing protein At5g01110 
 bdi-r.1  100833520  pentatricopeptide repeat-containing protein At5g01110 

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Top 50 coexpressed genes to 107954324 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954324 (ghi-r.1 coexpression data)

CoexMap"107954324"


ghiLOC107954324 | Entrez gene ID : 107954324
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 2 1 1 1 1 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016745341.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 2,  cyto_mito 2,  mito_plas 2  (predict for XP_016745341.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_016745341.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107954324


ghi-r.1
for
107953177


ath-u.5
for
AT5G01110


bra-r.6
for
117131527


bra-r.6
for
103855434


bna-r.1
for
106427419


bna-r.1
for
106426873


cit-r.1
for
102616749


gma-u.5
for
100816677


vvi-u.5
for
100244765


ppo-u.5
for
7463892


mtr-u.5
for
25494937


mtr-u.5
for
11429943


sly-u.5
for
101246240


sot-r.1
for
102603102


nta-r.1
for
107776524


nta-r.1
for
107812711


osa-u.5
for
4331727


zma-u.5
for
103631761


tae-r.2
for
123098525


tae-r.2
for
123093259


tae-r.2
for
123084824


hvu-r.1
for
123449525


sbi-r.1
for
8059842


bdi-r.1
for
100833520



Ortholog ID: 10309
Species ghi ghi ath bra bra bna bna cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107954324 LOC107953177 AT5G01110 LOC117131527 LOC103855434 LOC106427419 LOC106426873 LOC102616749 LOC100816677 LOC100244765 LOC7463892 LOC25494937 LOC11429943 LOC101246240 LOC102603102 LOC107776524 LOC107812711 LOC4331727 LOC103631761 LOC123098525 LOC123093259 LOC123084824 LOC123449525 LOC8059842 LOC100833520
Function* pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110-like pentatricopeptide repeat-containing protein At5g01110-like pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 uncharacterized LOC25494937 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g01110-like uncharacterized LOC107776524 uncharacterized LOC107812711 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110-like pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954324 107953177 831824 117131527 103855434 106427419 106426873 102616749 100816677 100244765 7463892 25494937 11429943 101246240 102603102 107776524 107812711 4331727 103631761 123098525 123093259 123084824 123449525 8059842 100833520
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