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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7493571   plant-specific TFIIB-related protein PTF2 
 ppo-u.5   7493571   plant-specific TFIIB-related protein PTF2 
 ppo-m.4   7493571   plant-specific TFIIB-related protein PTF2 
 gma-u.5   100796841   plant-specific TFIIB-related protein PTF2 
 mtr-u.5   11417451   plant-specific TFIIB-related protein PTF2 
 ath-u.5   AT4G35540   POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 
 bra-r.6   103875157   plant-specific TFIIB-related protein PTF2 
 vvi-u.5   100261683   plant-specific TFIIB-related protein PTF2 
 vvi-u.5   100260157   plant-specific TFIIB-related protein PTF2 
 ghi-r.1   107912674   plant-specific TFIIB-related protein PTF2 
 bna-r.1   106350502   plant-specific TFIIB-related protein PTF2 
 bna-r.1   106345822   plant-specific TFIIB-related protein PTF2-like 
 cit-r.1   102623089   plant-specific TFIIB-related protein PTF2 
 sly-u.5   101252255   plant-specific TFIIB-related protein PTF2 
 sot-r.1   102592908   transcription factor IIIB 60 kDa subunit 
 nta-r.1   107807487   plant-specific TFIIB-related protein PTF2 
 nta-r.1   142178982   plant-specific TFIIB-related protein PTF2-like 
 osa-u.5   4346140   plant-specific TFIIB-related protein PTF2 
 zma-u.5   103653218   uncharacterized LOC103653218 
 tae-r.2   123151924   plant-specific TFIIB-related protein PTF2 
 tae-r.2   123136771   plant-specific TFIIB-related protein PTF2 
 hvu-r.1   123411934   plant-specific TFIIB-related protein PTF2 
 sbi-r.1   8060948   plant-specific TFIIB-related protein PTF2 
 bdi-r.1   104583744   plant-specific TFIIB-related protein PTF2 

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Top 50 coexpressed genes to 7493571 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493571 (ppo-r.4 coexpression data)

CoexMap"7493571"


ppoLOC7493571 | Entrez gene ID : 7493571    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 2 1 2 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070897 [list] [network] transcription preinitiation complex assembly  (23 genes)  IEA  
GO:0006383 [list] [network] transcription by RNA polymerase III  (24 genes)  IEA  
GO:0006352 [list] [network] DNA-templated transcription initiation  (71 genes)  IEA  
GO CC
GO:0000126 [list] [network] transcription factor TFIIIB complex  (4 genes)  IEA  
GO:0097550 [list] [network] transcription preinitiation complex  (9 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0000995 [list] [network] RNA polymerase III general transcription initiation factor activity  (3 genes)  IEA  
GO:0001006 [list] [network] RNA polymerase III type 3 promoter sequence-specific DNA binding  (4 genes)  IEA  
Protein XP_024455359.2 [sequence] [blastp]
XP_024455378.2 [sequence] [blastp]
XP_052308175.1 [sequence] [blastp]
XP_052308176.1 [sequence] [blastp]
XP_052308177.1 [sequence] [blastp]
XP_052308178.1 [sequence] [blastp]
XP_052308179.1 [sequence] [blastp]
XP_052308180.1 [sequence] [blastp]
XP_052308181.1 [sequence] [blastp]
XP_052308182.1 [sequence] [blastp]
XP_052308183.1 [sequence] [blastp]
XP_052308184.1 [sequence] [blastp]
XP_052308185.1 [sequence] [blastp]
XP_052308186.1 [sequence] [blastp]
XP_052308187.1 [sequence] [blastp]
XP_052308188.1 [sequence] [blastp]
XP_052308189.1 [sequence] [blastp]
XP_052308190.1 [sequence] [blastp]
XP_052308191.1 [sequence] [blastp]
XP_052308192.1 [sequence] [blastp]
XP_052308193.1 [sequence] [blastp]
XP_052308194.1 [sequence] [blastp]
XP_052308195.1 [sequence] [blastp]
XP_052308196.1 [sequence] [blastp]
XP_052308197.1 [sequence] [blastp]
XP_052308198.1 [sequence] [blastp]
XP_052308199.1 [sequence] [blastp]
XP_052308200.1 [sequence] [blastp]
XP_052308201.1 [sequence] [blastp]
XP_052308202.1 [sequence] [blastp]
XP_052308203.1 [sequence] [blastp]
XP_052308204.1 [sequence] [blastp]
XP_052308205.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_024455359.2)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_024455378.2)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308175.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308176.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308177.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308178.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308179.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308180.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308181.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308182.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308183.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308184.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308185.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308186.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308187.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308188.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308189.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308190.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308191.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308192.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308193.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308194.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308195.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308196.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308197.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308198.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308199.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308200.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308201.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308202.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308203.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308204.1)
cyto 6,  cyto_nucl 4,  chlo 2,  extr 1,  E.R. 1  (predict for XP_052308205.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024455359.2)
other 8  (predict for XP_024455378.2)
other 8  (predict for XP_052308175.1)
other 8  (predict for XP_052308176.1)
other 8  (predict for XP_052308177.1)
other 8  (predict for XP_052308178.1)
other 8  (predict for XP_052308179.1)
other 8  (predict for XP_052308180.1)
other 8  (predict for XP_052308181.1)
other 8  (predict for XP_052308182.1)
other 8  (predict for XP_052308183.1)
other 8  (predict for XP_052308184.1)
other 8  (predict for XP_052308185.1)
other 8  (predict for XP_052308186.1)
other 8  (predict for XP_052308187.1)
other 8  (predict for XP_052308188.1)
other 8  (predict for XP_052308189.1)
other 8  (predict for XP_052308190.1)
other 8  (predict for XP_052308191.1)
other 8  (predict for XP_052308192.1)
other 8  (predict for XP_052308193.1)
other 8  (predict for XP_052308194.1)
other 8  (predict for XP_052308195.1)
other 8  (predict for XP_052308196.1)
other 8  (predict for XP_052308197.1)
other 8  (predict for XP_052308198.1)
other 8  (predict for XP_052308199.1)
other 8  (predict for XP_052308200.1)
other 8  (predict for XP_052308201.1)
other 8  (predict for XP_052308202.1)
other 8  (predict for XP_052308203.1)
other 8  (predict for XP_052308204.1)
other 8  (predict for XP_052308205.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7493571
ppo-u.5
for
7493571
ppo-m.4
for
7493571
gma-u.5
for
100796841
mtr-u.5
for
11417451
ath-u.5
for
AT4G35540
bra-r.6
for
103875157
vvi-u.5
for
100261683
vvi-u.5
for
100260157
ghi-r.1
for
107912674
bna-r.1
for
106350502
bna-r.1
for
106345822
cit-r.1
for
102623089
sly-u.5
for
101252255
sot-r.1
for
102592908
nta-r.1
for
107807487
nta-r.1
for
142178982
osa-u.5
for
4346140
zma-u.5
for
103653218
tae-r.2
for
123151924
tae-r.2
for
123136771
hvu-r.1
for
123411934
sbi-r.1
for
8060948
bdi-r.1
for
104583744


Ortholog ID: 10256
Species ppo gma mtr ath bra vvi vvi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC7493571 LOC100796841 LOC11417451 AT4G35540 LOC103875157 LOC100261683 LOC100260157 LOC107912674 LOC106350502 LOC106345822 LOC102623089 LOC101252255 LOC102592908 LOC107807487 LOC142178982 LOC4346140 LOC103653218 LOC123151924 LOC123136771 LOC123111971 LOC123411934 LOC8060948 LOC104583744
Function* plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2-like plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 transcription factor IIIB 60 kDa subunit plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2-like plant-specific TFIIB-related protein PTF2 uncharacterized LOC103653218 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7493571 100796841 11417451 829706 103875157 100261683 100260157 107912674 106350502 106345822 102623089 101252255 102592908 107807487 142178982 4346140 103653218 123151924 123136771 123111971 123411934 8060948 104583744
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