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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106350502   plant-specific TFIIB-related protein PTF2 
 ath-u.5   AT4G35540   POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 
 gma-u.5   100796841   plant-specific TFIIB-related protein PTF2 
 vvi-u.5   100261683   plant-specific TFIIB-related protein PTF2 
 vvi-u.5   100260157   plant-specific TFIIB-related protein PTF2 
 ppo-u.5   7493571   plant-specific TFIIB-related protein PTF2 
 mtr-u.5   11417451   plant-specific TFIIB-related protein PTF2 
 sly-u.5   101252255   plant-specific TFIIB-related protein PTF2 
 osa-u.5   4346140   plant-specific TFIIB-related protein PTF2 
 zma-u.5   103653218   uncharacterized LOC103653218 

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Top 50 coexpressed genes to 106350502 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106350502 (bna-r.1 coexpression data)

CoexMap"106350502"


bnaLOC106350502 | Entrez gene ID : 106350502    
Species bna ath gma vvi ppo mtr sly osa zma nta tae bdi sot bra sbi hvu cit cre ghi
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070897 [list] [network] transcription preinitiation complex assembly  (67 genes)  IEA  
GO:0006383 [list] [network] transcription by RNA polymerase III  (76 genes)  IEA  
GO:0006352 [list] [network] DNA-templated transcription initiation  (224 genes)  IEA  
GO CC
GO:0000126 [list] [network] transcription factor TFIIIB complex  (13 genes)  IEA  
GO:0097550 [list] [network] transcription preinitiation complex  (30 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0000995 [list] [network] RNA polymerase III general transcription initiation factor activity  (9 genes)  IEA  
GO:0001006 [list] [network] RNA polymerase III type 3 promoter sequence-specific DNA binding  (11 genes)  IEA  
Protein XP_013645855.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  nucl 1,  plas 1,  extr 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_013645855.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013645855.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106350502

.
ath-u.5
for
AT4G35540

.
gma-u.5
for
100796841

.
vvi-u.5
for
100261683

.
vvi-u.5
for
100260157

.
ppo-u.5
for
7493571

.
mtr-u.5
for
11417451

.
sly-u.5
for
101252255

.
osa-u.5
for
4346140

.
zma-u.5
for
103653218

.


Ortholog ID: 10256
Species ath gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G35540 LOC100796841 LOC101252255 LOC4346140 LOC103653218 LOC103875157 LOC100261683 LOC100260157 LOC7493571 LOC11417451 LOC123136771 LOC123111971 LOC123411934 LOC107912674 LOC106345822 LOC106350502 LOC8060948 LOC102592908 LOC102623089 LOC104583744 LOC142178982 LOC107807487
Function* POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 uncharacterized LOC103653218 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2-like plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 transcription factor IIIB 60 kDa subunit plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2 plant-specific TFIIB-related protein PTF2-like plant-specific TFIIB-related protein PTF2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829706 100796841 101252255 4346140 103653218 103875157 100261683 100260157 7493571 11417451 123136771 123111971 123411934 107912674 106345822 106350502 8060948 102592908 102623089 104583744 142178982 107807487
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