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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104083   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ppo-r.4   18104083   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 gma-u.5   100782031   pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5   100853131   pentatricopeptide repeat-containing protein At3g62890 
 cit-r.1   107178299   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 

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Top 50 coexpressed genes to 18104083 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18104083 (ppo-u.5 coexpression data)

CoexMap"18104083"


ppoLOC18104083 | Entrez gene ID : 18104083    
Species ppo gma vvi cit cre bra ath mtr hvu nta bna tae bdi osa zma sly ghi sot sbi
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024439436.2 [sequence] [blastp]
XP_052302440.1 [sequence] [blastp]
XP_052302441.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024439436.2)
cyto 4,  mito 3,  cyto_pero 3  (predict for XP_052302440.1)
cyto 4,  mito 3,  cyto_pero 3  (predict for XP_052302441.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_024439436.2)
other 8  (predict for XP_052302440.1)
other 8  (predict for XP_052302441.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104083
ppo-r.4
for
18104083
gma-u.5
for
100782031
vvi-u.5
for
100853131
cit-r.1
for
107178299


Ortholog ID: 15579
Species ppo gma vvi cit
Symbol LOC18104083 LOC100782031 LOC100853131 LOC107178299
Function* pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At1g11290, chloroplastic
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18104083 100782031 100853131 107178299
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