Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104083   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ppo-r.4   18104083   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 gma-u.5   100782031   pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5   100853131   pentatricopeptide repeat-containing protein At3g62890 

close


Top 50 coexpressed genes to 18104083 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 18104083 (ppo-u.5 coexpression data)

CoexMap"18104083"


ppoLOC18104083 | Entrez gene ID : 18104083    
Species ppo gma vvi hvu mtr tae nta bra cit ghi zma bdi sly sbi ath cre osa sot bna
Paralog 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024439436.2 [sequence] [blastp]
XP_052302440.1 [sequence] [blastp]
XP_052302441.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024439436.2)
cyto 4,  mito 3,  cyto_pero 3  (predict for XP_052302440.1)
cyto 4,  mito 3,  cyto_pero 3  (predict for XP_052302441.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_024439436.2)
other 8  (predict for XP_052302440.1)
other 8  (predict for XP_052302441.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104083

.
ppo-r.4
for
18104083

.
gma-u.5
for
100782031

.
vvi-u.5
for
100853131

.


Ortholog ID: 15579
Species vvi ppo cit
Symbol LOC100853131 LOC18104083 LOC107178299
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100853131 18104083 107178299
The preparation time of this page was 0.2 [sec].