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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7462243   geranylgeranyl transferase type-2 subunit alpha 1 
 ppo-r.4   7462243   geranylgeranyl transferase type-2 subunit alpha 1 
 ppo-m.4   7462243   geranylgeranyl transferase type-2 subunit alpha 1 
 gma-u.5   100780581   geranylgeranyl transferase type-2 subunit alpha 1 
 gma-u.5   100807900   geranylgeranyl transferase type-2 subunit alpha 1 
 gma-u.5   100783193   geranylgeranyl transferase type-2 subunit alpha 1 
 mtr-u.5   11423207   geranylgeranyl transferase type-2 subunit alpha 1 
 ath-u.5   RGTA1   RAB geranylgeranyl transferase alpha subunit 1 
 bra-r.6   103861487   geranylgeranyl transferase type-2 subunit alpha 1 
 bra-r.6   103862144   geranylgeranyl transferase type-2 subunit alpha 1 
 vvi-u.5   100248920   geranylgeranyl transferase type-2 subunit alpha 1 
 ghi-r.1   107931606   geranylgeranyl transferase type-2 subunit alpha 1 
 ghi-r.1   107962198   geranylgeranyl transferase type-2 subunit alpha 1 
 ghi-r.1   107943888   geranylgeranyl transferase type-2 subunit alpha 1 
 bna-r.1   106442037   geranylgeranyl transferase type-2 subunit alpha 1-like 
 bna-r.1   106348926   geranylgeranyl transferase type-2 subunit alpha 1-like 
 bna-r.1   106396711   geranylgeranyl transferase type-2 subunit alpha 1-like 
 cit-r.1   102615884   geranylgeranyl transferase type-2 subunit alpha 1 
 sly-u.5   101257956   geranylgeranyl transferase type-2 subunit alpha 1 
 sot-r.1   102602760   uncharacterized LOC102602760 
 nta-r.1   107803956   geranylgeranyl transferase type-2 subunit alpha 1-like 
 nta-r.1   107794990   geranylgeranyl transferase type-2 subunit alpha 1 
 osa-u.5   4341838   geranylgeranyl transferase type-2 subunit alpha 1 
 zma-u.5   100285137   rab geranylgeranyl transferase like protein 
 zma-u.5   100501641   Geranylgeranyl transferase type-2 subunit alpha 1 
 tae-r.2   123165328   geranylgeranyl transferase type-2 subunit alpha 1 
 tae-r.2   123156411   geranylgeranyl transferase type-2 subunit alpha 1 
 tae-r.2   123149079   geranylgeranyl transferase type-2 subunit alpha 1 
 hvu-r.1   123413324   geranylgeranyl transferase type-2 subunit alpha 1 
 sbi-r.1   8061610   geranylgeranyl transferase type-2 subunit alpha 1 
 bdi-r.1   100838450   geranylgeranyl transferase type-2 subunit alpha 1 
 cre-r.1   CHLRE_07g339350v5   uncharacterized protein 

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Top 50 coexpressed genes to 7462243 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7462243 (ppo-u.5 coexpression data)

CoexMap"7462243"


ppoLOC7462243 | Entrez gene ID : 7462243    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 1 1 2 1 3 3 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018344 [list] [network] protein geranylgeranylation  (8 genes)  IEA  
GO CC
GO:0005968 [list] [network] Rab-protein geranylgeranyltransferase complex  (4 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0004663 [list] [network] Rab geranylgeranyltransferase activity  (2 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002309487.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for XP_002309487.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_002309487.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7462243
ppo-r.4
for
7462243
ppo-m.4
for
7462243
gma-u.5
for
100780581
gma-u.5
for
100807900
gma-u.5
for
100783193
mtr-u.5
for
11423207
ath-u.5
for
RGTA1
bra-r.6
for
103861487
bra-r.6
for
103862144
vvi-u.5
for
100248920
ghi-r.1
for
107931606
ghi-r.1
for
107962198
ghi-r.1
for
107943888
bna-r.1
for
106442037
bna-r.1
for
106348926
bna-r.1
for
106396711
cit-r.1
for
102615884
sly-u.5
for
101257956
sot-r.1
for
102602760
nta-r.1
for
107803956
nta-r.1
for
107794990
osa-u.5
for
4341838
zma-u.5
for
100285137
zma-u.5
for
100501641
tae-r.2
for
123165328
tae-r.2
for
123156411
tae-r.2
for
123149079
hvu-r.1
for
123413324
sbi-r.1
for
8061610
bdi-r.1
for
100838450
cre-r.1
for
CHLRE_07g339350v5


Ortholog ID: 6620
Species ppo gma gma gma mtr ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC7462243 LOC100780581 LOC100807900 LOC100783193 LOC11423207 RGTA1 LOC103861487 LOC103862144 LOC100248920 LOC107962198 LOC107943888 LOC107942930 LOC106442037 LOC106396711 LOC106440797 LOC102615884 LOC101257956 LOC102602760 LOC107803956 LOC107794990 LOC4341838 LOC100285137 LOC100501641 LOC123165328 LOC123156411 LOC123149079 LOC123413324 LOC8061610 LOC100838450 CHLRE_07g339350v5
Function* geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 RAB geranylgeranyl transferase alpha subunit 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1-like geranylgeranyl transferase type-2 subunit alpha 1-like geranylgeranyl transferase type-2 subunit alpha 1-like geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 uncharacterized LOC102602760 geranylgeranyl transferase type-2 subunit alpha 1-like geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 rab geranylgeranyl transferase like protein Geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 geranylgeranyl transferase type-2 subunit alpha 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo05100 Bacterial invasion of epithelial cells 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 3
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi00240 Pyrimidine metabolism 2
vvi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
ghi04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 3
ghi04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 3
ghi04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 8
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
osa03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7462243 100780581 100807900 100783193 11423207 828551 103861487 103862144 100248920 107962198 107943888 107942930 106442037 106396711 106440797 102615884 101257956 102602760 107803956 107794990 4341838 100285137 100501641 123165328 123156411 123149079 123413324 8061610 100838450 5718092
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