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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466760   farnesylcysteine lyase 
 ppo-r.4   7466760   farnesylcysteine lyase 
 ppo-u.5   18100924   farnesylcysteine lyase 
 gma-u.5   100819877   farnesylcysteine lyase 
 mtr-u.5   25489862   farnesylcysteine lyase 
 ath-u.5   FCLY   farnesylcysteine lyase 
 bra-r.6   103873809   farnesylcysteine lyase 
 vvi-u.5   100268071   farnesylcysteine lyase 
 ghi-r.1   107945423   farnesylcysteine lyase 
 ghi-r.1   107925476   farnesylcysteine lyase 
 bna-r.1   106347946   farnesylcysteine lyase 
 bna-r.1   106348069   farnesylcysteine lyase 
 cit-r.1   102619140   farnesylcysteine lyase 
 sly-u.5   101250000   farnesylcysteine lyase 
 sot-r.1   102583614   farnesylcysteine lyase 
 nta-r.1   107826766   farnesylcysteine lyase 
 nta-r.1   107773308   farnesylcysteine lyase 
 zma-u.5   103642227   farnesylcysteine lyase 
 tae-r.2   123055345   farnesylcysteine lyase 
 tae-r.2   123191158   farnesylcysteine lyase 
 hvu-r.1   123428509   farnesylcysteine lyase 
 sbi-r.1   8064304   farnesylcysteine lyase 
 bdi-r.1   100821994   farnesylcysteine lyase 
 cre-r.1   CHLRE_10g425200v5   uncharacterized protein 

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Top 50 coexpressed genes to 7466760 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466760 (ppo-u.5 coexpression data)

CoexMap"7466760"


ppoLOC7466760 | Entrez gene ID : 7466760    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta zma tae hvu sbi bdi cre osa
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00900 [list] [network] Terpenoid backbone biosynthesis (75 genes)
GO BP
GO:0030327 [list] [network] prenylated protein catabolic process  (2 genes)  IEA  
GO:0030328 [list] [network] prenylcysteine catabolic process  (2 genes)  IEA  
GO CC
GO MF
GO:0001735 [list] [network] prenylcysteine oxidase activity  (2 genes)  IEA  
Protein XP_002309934.4 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_002309934.4)
Subcellular
localization
TargetP
scret 8  (predict for XP_002309934.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466760
ppo-r.4
for
7466760
ppo-u.5
for
18100924
gma-u.5
for
100819877
mtr-u.5
for
25489862
ath-u.5
for
FCLY
bra-r.6
for
103873809
vvi-u.5
for
100268071
ghi-r.1
for
107945423
ghi-r.1
for
107925476
bna-r.1
for
106347946
bna-r.1
for
106348069
cit-r.1
for
102619140
sly-u.5
for
101250000
sot-r.1
for
102583614
nta-r.1
for
107826766
nta-r.1
for
107773308
zma-u.5
for
103642227
tae-r.2
for
123055345
tae-r.2
for
123191158
hvu-r.1
for
123428509
sbi-r.1
for
8064304
bdi-r.1
for
100821994
cre-r.1
for
CHLRE_10g425200v5


Ortholog ID: 9191
Species ppo ppo gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta zma tae tae hvu sbi bdi cre
Symbol LOC7466760 LOC18100924 LOC100819877 LOC25489862 FCLY LOC103873809 LOC100268071 LOC107945423 LOC107925476 LOC106347946 LOC106348069 LOC102619140 LOC101250000 LOC102583614 LOC107826766 LOC107773308 LOC103642227 LOC123191158 LOC123047537 LOC123428509 LOC8064304 LOC100821994 CHLRE_10g425200v5
Function* farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
ppo04142 Lysosome 3
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo04142 Lysosome 2
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 5
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna03050 Proteasome 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit04144 Endocytosis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sly00940 Phenylpropanoid biosynthesis 2
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 4
sot00190 Oxidative phosphorylation 3
sot00220 Arginine biosynthesis 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta00220 Arginine biosynthesis 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta00220 Arginine biosynthesis 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00100 Steroid biosynthesis 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00020 Citrate cycle (TCA cycle) 4
bdi01230 Biosynthesis of amino acids 4
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00620 Pyruvate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7466760 18100924 100819877 25489862 836512 103873809 100268071 107945423 107925476 106347946 106348069 102619140 101250000 102583614 107826766 107773308 103642227 123191158 123047537 123428509 8064304 100821994 66054965
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