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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123055345   farnesylcysteine lyase 
 tae-r.2   123047537   farnesylcysteine lyase 
 tae-r.2   123191158   farnesylcysteine lyase 
 hvu-r.1   123428509   farnesylcysteine lyase 
 bdi-r.1   100821994   farnesylcysteine lyase 
 zma-u.5   103642227   farnesylcysteine lyase 
 sbi-r.1   8064304   farnesylcysteine lyase 
 ath-u.5   FCLY   farnesylcysteine lyase 
 gma-u.5   100819877   farnesylcysteine lyase 
 sly-u.5   101250000   farnesylcysteine lyase 
 bra-r.6   103873809   farnesylcysteine lyase 
 vvi-u.5   100268071   farnesylcysteine lyase 
 ppo-u.5   7466760   farnesylcysteine lyase 
 ppo-u.5   18100924   farnesylcysteine lyase 
 mtr-u.5   25489862   farnesylcysteine lyase 
 ghi-r.1   107945423   farnesylcysteine lyase 
 ghi-r.1   107925476   farnesylcysteine lyase 
 bna-r.1   106348069   farnesylcysteine lyase 
 bna-r.1   106347946   farnesylcysteine lyase 
 sot-r.1   102583614   farnesylcysteine lyase 
 cit-r.1   102619140   farnesylcysteine lyase 
 nta-r.1   107826766   farnesylcysteine lyase 
 nta-r.1   107773308   farnesylcysteine lyase 
 cre-r.1   CHLRE_10g425200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123055345 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123055345 (tae-r.2 coexpression data)

CoexMap"123055345"


taeLOC123055345 | Entrez gene ID : 123055345    
Species tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre osa
Paralog 3 1 1 1 1 1 1 1 1 1 2 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00900 [list] [network] Terpenoid backbone biosynthesis (187 genes)
GO BP
GO:0030328 [list] [network] prenylcysteine catabolic process  (3 genes)  IEA  
GO:0030327 [list] [network] prenylated protein catabolic process  (4 genes)  IEA  
GO CC
GO MF
GO:0001735 [list] [network] prenylcysteine oxidase activity  (4 genes)  IEA  
Protein XP_044335277.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  E.R. 3,  plas 1,  E.R._vacu 1,  chlo 1,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1  (predict for XP_044335277.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_044335277.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123055345
tae-r.2
for
123047537
tae-r.2
for
123191158
hvu-r.1
for
123428509
bdi-r.1
for
100821994
zma-u.5
for
103642227
sbi-r.1
for
8064304
ath-u.5
for
FCLY
gma-u.5
for
100819877
sly-u.5
for
101250000
bra-r.6
for
103873809
vvi-u.5
for
100268071
ppo-u.5
for
7466760
ppo-u.5
for
18100924
mtr-u.5
for
25489862
ghi-r.1
for
107945423
ghi-r.1
for
107925476
bna-r.1
for
106348069
bna-r.1
for
106347946
sot-r.1
for
102583614
cit-r.1
for
102619140
nta-r.1
for
107826766
nta-r.1
for
107773308
cre-r.1
for
CHLRE_10g425200v5


Ortholog ID: 9191
Species tae tae hvu bdi zma sbi ath gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123047537 LOC123191158 LOC123428509 LOC100821994 LOC103642227 LOC8064304 FCLY LOC100819877 LOC101250000 LOC103873809 LOC100268071 LOC7466760 LOC18100924 LOC25489862 LOC107945423 LOC107925476 LOC106348069 LOC106347946 LOC102583614 LOC102619140 LOC107826766 LOC107773308 CHLRE_10g425200v5
Function* farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00020 Citrate cycle (TCA cycle) 4
bdi01230 Biosynthesis of amino acids 4
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00100 Steroid biosynthesis 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 5
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sly00940 Phenylpropanoid biosynthesis 2
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
ppo04142 Lysosome 3
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo04142 Lysosome 2
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna03050 Proteasome 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 4
sot00190 Oxidative phosphorylation 3
sot00220 Arginine biosynthesis 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit04144 Endocytosis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta00220 Arginine biosynthesis 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta00220 Arginine biosynthesis 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123047537 123191158 123428509 100821994 103642227 8064304 836512 100819877 101250000 103873809 100268071 7466760 18100924 25489862 107945423 107925476 106348069 106347946 102583614 102619140 107826766 107773308 66054965
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