ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7471092	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
ppo-r.4	7471092	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
ppo-m.4	7471092	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
gma-u.5	100812111	uncharacterized LOC100812111
gma-u.5	100790128	uncharacterized LOC100790128
mtr-u.5	11416822	uncharacterized LOC11416822
ath-u.5	RFC3	Translation elongation factor EF1B/ribosomal protein S6 family protein
bra-r.6	103839669	nucleolar transcription factor 1-A
vvi-u.5	100243195	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
ghi-r.1	107916220	acidic leucine-rich nuclear phosphoprotein 32 family member A
ghi-r.1	107896404	putative vacuolar protein sorting-associated protein 13F
bna-r.1	106437134	nucleolar transcription factor 1
bna-r.1	106401850	glutamic acid-rich protein
cit-r.1	102607783	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
sly-u.5	101245198	ribosomal protein S6-like protein
sot-r.1	102594367	uncharacterized LOC102594367
nta-r.1	107759286	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
nta-r.1	107764056	protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
zma-u.5	100284375	30S ribosomal protein S6-like
tae-r.2	123119752	uncharacterized LOC123119752
tae-r.2	123110746	uncharacterized LOC123110746
tae-r.2	123102554	uncharacterized LOC123102554
hvu-r.1	123452761	uncharacterized LOC123452761
sbi-r.1	8068847	uncharacterized LOC8068847
bdi-r.1	100824031	30S ribosomal protein S6

Annotation

functional annotation

KEGG

GO BP

GO:0006412 [list] [network] translation

(598 genes)

IEA

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit	(109 genes)	IEA
GO:0005840 [list] [network] ribosome	(453 genes)	IEA

GO MF

GO:0070181 [list] [network] small ribosomal subunit rRNA binding	(15 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(439 genes)	IEA

Protein

XP_002311372.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, chlo 2, cyto 2

(predict for XP_002311372.1)

Subcellular
localization
TargetP

chlo 6, mito 4

(predict for XP_002311372.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7471092	ppo-r.4 for 7471092	ppo-m.4 for 7471092	gma-u.5 for 100812111	gma-u.5 for 100790128	mtr-u.5 for 11416822	ath-u.5 for RFC3	bra-r.6 for 103839669	vvi-u.5 for 100243195	ghi-r.1 for 107916220	ghi-r.1 for 107896404	bna-r.1 for 106437134	bna-r.1 for 106401850	cit-r.1 for 102607783	sly-u.5 for 101245198	sot-r.1 for 102594367	nta-r.1 for 107759286	nta-r.1 for 107764056	zma-u.5 for 100284375	tae-r.2 for 123119752	tae-r.2 for 123110746	tae-r.2 for 123102554	hvu-r.1 for 123452761	sbi-r.1 for 8068847	bdi-r.1 for 100824031