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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916220   acidic leucine-rich nuclear phosphoprotein 32 family member A 
 ghi-r.1   107896404   putative vacuolar protein sorting-associated protein 13F 
 ath-u.5   RFC3   Translation elongation factor EF1B/ribosomal protein S6 family protein 
 bra-r.6   103839669   nucleolar transcription factor 1-A 
 bna-r.1   106401850   glutamic acid-rich protein 
 bna-r.1   106437134   nucleolar transcription factor 1 
 cit-r.1   102607783   protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 gma-u.5   100812111   uncharacterized LOC100812111 
 gma-u.5   100790128   uncharacterized LOC100790128 
 vvi-u.5   100243195   protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 ppo-u.5   7471092   protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 mtr-u.5   11416822   uncharacterized LOC11416822 
 sly-u.5   101245198   ribosomal protein S6-like protein 
 sot-r.1   102594367   uncharacterized LOC102594367 
 nta-r.1   107764056   protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 nta-r.1   107759286   protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 zma-u.5   100284375   30S ribosomal protein S6-like 
 tae-r.2   123119752   uncharacterized LOC123119752 
 tae-r.2   123110746   uncharacterized LOC123110746 
 tae-r.2   123102554   uncharacterized LOC123102554 
 hvu-r.1   123452761   uncharacterized LOC123452761 
 sbi-r.1   8068847   uncharacterized LOC8068847 
 bdi-r.1   100824031   30S ribosomal protein S6 

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Top 50 coexpressed genes to 107916220 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107916220 (ghi-r.1 coexpression data)

CoexMap""


ghiLOC107916220 | Entrez gene ID : 107916220    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function acidic leucine-rich nuclear phosphoprotein 32 family member A
KEGG
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (321 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (23 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016700865.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 2  (predict for XP_016700865.2)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_016700865.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107916220


ghi-r.1
for
107896404


ath-u.5
for
RFC3


bra-r.6
for
103839669


bna-r.1
for
106401850


bna-r.1
for
106437134


cit-r.1
for
102607783


gma-u.5
for
100812111


gma-u.5
for
100790128


vvi-u.5
for
100243195


ppo-u.5
for
7471092


mtr-u.5
for
11416822


sly-u.5
for
101245198


sot-r.1
for
102594367


nta-r.1
for
107764056


nta-r.1
for
107759286


zma-u.5
for
100284375


tae-r.2
for
123119752


tae-r.2
for
123110746


tae-r.2
for
123102554


hvu-r.1
for
123452761


sbi-r.1
for
8068847


bdi-r.1
for
100824031

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Ortholog ID: 10774
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta zma tae tae tae hvu sbi bdi
Symbol LOC107916220 LOC107896404 RFC3 LOC103839669 LOC106401850 LOC106437134 LOC102607783 LOC100812111 LOC100790128 LOC100243195 LOC7471092 LOC11416822 LOC101245198 LOC102594367 LOC107764056 LOC107759286 LOC100284375 LOC123119752 LOC123110746 LOC123102554 LOC123452761 LOC8068847 LOC100824031
Function* acidic leucine-rich nuclear phosphoprotein 32 family member A putative vacuolar protein sorting-associated protein 13F Translation elongation factor EF1B/ribosomal protein S6 family protein nucleolar transcription factor 1-A glutamic acid-rich protein nucleolar transcription factor 1 protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic uncharacterized LOC100812111 uncharacterized LOC100790128 protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic uncharacterized LOC11416822 ribosomal protein S6-like protein uncharacterized LOC102594367 protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 30S ribosomal protein S6-like uncharacterized LOC123119752 uncharacterized LOC123110746 uncharacterized LOC123102554 uncharacterized LOC123452761 uncharacterized LOC8068847 30S ribosomal protein S6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916220 107896404 820974 103839669 106401850 106437134 102607783 100812111 100790128 100243195 7471092 11416822 101245198 102594367 107764056 107759286 100284375 123119752 123110746 123102554 123452761 8068847 100824031
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