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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479296   putative pentatricopeptide repeat-containing protein At3g25970 
 ppo-r.4   7479296   putative pentatricopeptide repeat-containing protein At3g25970 
 vvi-u.5   104881090   pentatricopeptide repeat-containing protein At2g13600 
 ghi-r.1   107947052   pentatricopeptide repeat-containing protein At3g05340 
 ghi-r.1   121211149   pentatricopeptide repeat-containing protein At2g33680 
 cit-r.1   102619208   pentatricopeptide repeat-containing protein At4g13650-like 

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Top 50 coexpressed genes to 7479296 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479296 (ppo-u.5 coexpression data)

CoexMap"7479296"


ppoLOC7479296 | Entrez gene ID : 7479296    
Species ppo vvi ghi cit sbi osa gma sot sly mtr bra tae ath bna hvu zma cre nta bdi
Paralog 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024456914.2 [sequence] [blastp]
XP_024456917.2 [sequence] [blastp]
XP_024456922.2 [sequence] [blastp]
XP_024456927.2 [sequence] [blastp]
XP_024456929.2 [sequence] [blastp]
XP_052303309.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_024456914.2)
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_024456917.2)
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_024456922.2)
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_024456927.2)
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_024456929.2)
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_052303309.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_024456914.2)
mito 6  (predict for XP_024456917.2)
mito 6  (predict for XP_024456922.2)
mito 6  (predict for XP_024456927.2)
mito 6  (predict for XP_024456929.2)
mito 6  (predict for XP_052303309.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479296
ppo-r.4
for
7479296
vvi-u.5
for
104881090
ghi-r.1
for
107947052
ghi-r.1
for
121211149
cit-r.1
for
102619208


Ortholog ID: 21363
Species ppo vvi ghi ghi cit
Symbol LOC7479296 LOC104881090 LOC107947052 LOC121211149 LOC102619208
Function* putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At4g13650-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7479296 104881090 107947052 121211149 102619208
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