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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121211149   pentatricopeptide repeat-containing protein At2g33680 
 ghi-r.1   107947052   pentatricopeptide repeat-containing protein At3g05340 
 cit-r.1   102619208   pentatricopeptide repeat-containing protein At4g13650-like 
 vvi-u.5   104881090   pentatricopeptide repeat-containing protein At2g13600 
 ppo-u.5   7479296   putative pentatricopeptide repeat-containing protein At3g25970 

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Top 50 coexpressed genes to 121211149 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121211149 (ghi-r.1 coexpression data)

CoexMap"121211149"


ghiLOC121211149 | Entrez gene ID : 121211149    
Species ghi cit vvi ppo sot bdi sly nta osa tae bna zma cre mtr sbi gma bra ath hvu
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040939501.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for XP_040939501.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_040939501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121211149
ghi-r.1
for
107947052
cit-r.1
for
102619208
vvi-u.5
for
104881090
ppo-u.5
for
7479296


Ortholog ID: 21363
Species ghi ghi cit vvi ppo
Symbol LOC121211149 LOC107947052 LOC102619208 LOC104881090 LOC7479296
Function* pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At2g13600 putative pentatricopeptide repeat-containing protein At3g25970
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121211149 107947052 102619208 104881090 7479296
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