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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-r.4   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-m.4   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-u.5   7455878   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 gma-u.5   100801862   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 gma-u.5   100796145   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 mtr-u.5   11446406   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 mtr-u.5   11429085   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ath-u.5   emb1688   Minichromosome maintenance (MCM2/3/5) family protein 
 bra-r.6   103831170   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 vvi-u.5   100247229   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ghi-r.1   107898631   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ghi-r.1   107933405   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 bna-r.1   106405828   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 bna-r.1   106454172   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 cit-r.1   102627863   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 sly-u.5   101267706   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 sot-r.1   102581593   putative ribosome biogenesis GTPase RsgA 1 
 nta-r.1   107788041   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 nta-r.1   107787854   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 osa-u.5   4335637   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 zma-u.5   100285891   Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 tae-r.2   123189033   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 tae-r.2   123053126   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 tae-r.2   123045288   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 hvu-r.1   123426517   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 sbi-r.1   8070789   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 bdi-r.1   100831693   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 cre-r.1   CHLRE_10g436600v5   uncharacterized protein 

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Top 50 coexpressed genes to 7479622 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479622 (ppo-u.5 coexpression data)

CoexMap"7479622"


ppoLOC7479622 | Entrez gene ID : 7479622    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00730 [list] [network] Thiamine metabolism (31 genes)
GO BP
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_024458298.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2,  cyto_mito 2  (predict for XP_024458298.2)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_024458298.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479622
ppo-r.4
for
7479622
ppo-m.4
for
7479622
ppo-u.5
for
7455878
gma-u.5
for
100801862
gma-u.5
for
100796145
mtr-u.5
for
11446406
mtr-u.5
for
11429085
ath-u.5
for
emb1688
bra-r.6
for
103831170
vvi-u.5
for
100247229
ghi-r.1
for
107898631
ghi-r.1
for
107933405
bna-r.1
for
106405828
bna-r.1
for
106454172
cit-r.1
for
102627863
sly-u.5
for
101267706
sot-r.1
for
102581593
nta-r.1
for
107788041
nta-r.1
for
107787854
osa-u.5
for
4335637
zma-u.5
for
100285891
tae-r.2
for
123189033
tae-r.2
for
123053126
tae-r.2
for
123045288
hvu-r.1
for
123426517
sbi-r.1
for
8070789
bdi-r.1
for
100831693
cre-r.1
for
CHLRE_10g436600v5


Ortholog ID: 8759
Species ppo ppo gma gma mtr mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC7479622 LOC7455878 LOC100801862 LOC100796145 LOC11446406 LOC11429085 emb1688 LOC103831170 LOC100247229 LOC107898631 LOC107933405 LOC106405828 LOC106454172 LOC102627863 LOC101267706 LOC102581593 LOC107788041 LOC107787854 LOC4335637 LOC100285891 LOC123189033 LOC123053126 LOC123045288 LOC123426517 LOC8070789 LOC100831693 CHLRE_10g436600v5
Function* small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial Minichromosome maintenance (MCM2/3/5) family protein small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial putative ribosome biogenesis GTPase RsgA 1 small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00730 Thiamine metabolism 3
gma03040 Spliceosome 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta04141 Protein processing in endoplasmic reticulum 4
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7479622 7455878 100801862 100796145 11446406 11429085 843064 103831170 100247229 107898631 107933405 106405828 106454172 102627863 101267706 102581593 107788041 107787854 4335637 100285891 123189033 123053126 123045288 123426517 8070789 100831693 5715970
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