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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-r.4   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-m.4   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-u.5   7455878   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 gma-u.5   100801862   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 gma-u.5   100796145   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 mtr-u.5   11446406   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 mtr-u.5   11429085   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ath-u.5   emb1688   Minichromosome maintenance (MCM2/3/5) family protein 
 vvi-u.5   100247229   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 sly-u.5   101267706   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 osa-u.5   4335637   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 zma-u.5   100285891   Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 

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Top 50 coexpressed genes to 7479622 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479622 (ppo-u.5 coexpression data)

CoexMap"7479622"


ppoLOC7479622 | Entrez gene ID : 7479622    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00730 [list] [network] Thiamine metabolism (31 genes)
GO BP
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_024458298.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2,  cyto_mito 2  (predict for XP_024458298.2)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_024458298.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479622

.
ppo-r.4
for
7479622

.
ppo-m.4
for
7479622

.
ppo-u.5
for
7455878

.
gma-u.5
for
100801862

.
gma-u.5
for
100796145

.
mtr-u.5
for
11446406

.
mtr-u.5
for
11429085

.
ath-u.5
for
emb1688

.
vvi-u.5
for
100247229

.
sly-u.5
for
101267706

.
osa-u.5
for
4335637

.
zma-u.5
for
100285891

.


Ortholog ID: 8759
Species ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb1688 LOC100801862 LOC100796145 LOC101267706 LOC4335637 LOC100285891 LOC103831170 LOC100247229 LOC7479622 LOC7455878 LOC11446406 LOC11429085 LOC123189033 LOC123053126 LOC123426517 LOC107898631 LOC107933405 LOC106454172 LOC106405828 CHLRE_10g436600v5 LOC8070789 LOC102581593 LOC102627863 LOC100831693 LOC107788041 LOC107787854
Function* Minichromosome maintenance (MCM2/3/5) family protein small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial uncharacterized protein small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial putative ribosome biogenesis GTPase RsgA 1 small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00730 Thiamine metabolism 3
gma03040 Spliceosome 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta04141 Protein processing in endoplasmic reticulum 4
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843064 100801862 100796145 101267706 4335637 100285891 103831170 100247229 7479622 7455878 11446406 11429085 123189033 123053126 123426517 107898631 107933405 106454172 106405828 5715970 8070789 102581593 102627863 100831693 107788041 107787854
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