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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479727   bifunctional nuclease 1 
 ppo-r.4   7479727   bifunctional nuclease 1 
 ppo-m.4   7479727   bifunctional nuclease 1 
 ppo-u.5   18099114   bifunctional nuclease 2 
 gma-u.5   100807950   bifunctional nuclease 1 
 gma-u.5   100775199   bifunctional nuclease 1 
 gma-u.5   100801243   bifunctional nuclease 2 
 mtr-u.5   25482175   bifunctional nuclease 1 
 mtr-u.5   25490215   bifunctional nuclease 1 
 mtr-u.5   11425357   bifunctional nuclease 2 
 ath-u.5   AT5G66050   Wound-responsive family protein 
 ath-u.5   AT1G19660   Wound-responsive family protein 
 ath-u.5   BBD1   bifunctional nuclease in basal defense response 1 
 bra-r.6   103872767   bifunctional nuclease 2 
 bra-r.6   103852946   bifunctional nuclease 1 
 bra-r.6   103837664   bifunctional nuclease 2 
 vvi-u.5   100855103   bifunctional nuclease 2 
 vvi-u.5   100855204   bifunctional nuclease 2 
 ghi-r.1   107943432   bifunctional nuclease 1 
 ghi-r.1   107905451   bifunctional nuclease 2 
 ghi-r.1   107910198   bifunctional nuclease 1 
 bna-r.1   106392234   bifunctional nuclease 2 
 bna-r.1   106397218   bifunctional nuclease 1-like 
 bna-r.1   106414994   bifunctional nuclease 2 
 cit-r.1   102607680   bifunctional nuclease 2 
 cit-r.1   102622452   bifunctional nuclease 1 
 sly-u.5   101263903   bifunctional nuclease 2 
 sly-u.5   101247280   bifunctional nuclease 2 
 sly-u.5   101247196   bifunctional nuclease 1 
 sot-r.1   102579692   bifunctional nuclease 2 
 sot-r.1   102591631   bifunctional nuclease 1-like 
 sot-r.1   102600753   bifunctional nuclease 2 
 nta-r.1   107795746   bifunctional nuclease 2-like 
 nta-r.1   107790732   bifunctional nuclease 2 
 nta-r.1   107799725   bifunctional nuclease 1 
 osa-u.5   4326932   bifunctional nuclease 1-like 
 osa-u.5   4345362   bifunctional nuclease 2-like 
 zma-u.5   103652143   bifunctional nuclease 2 
 zma-u.5   103634274   bifunctional nuclease 2 
 zma-u.5   100280101   uncharacterized LOC100280101 
 tae-r.2   123146876   bifunctional nuclease 2 
 tae-r.2   123139254   bifunctional nuclease 
 tae-r.2   123164920   bifunctional nuclease 2 
 hvu-r.1   123407505   bifunctional nuclease 2 
 hvu-r.1   123404035   bifunctional nuclease-like 
 sbi-r.1   110429846   bifunctional nuclease 1-like 
 sbi-r.1   110436962   bifunctional nuclease 2 
 bdi-r.1   100846274   bifunctional nuclease 1 
 bdi-r.1   100830958   bifunctional nuclease 2 
 cre-r.1   CHLRE_16g688302v5   uncharacterized protein 

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Top 50 coexpressed genes to 7479727 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479727 (ppo-u.5 coexpression data)

CoexMap"7479727"


ppoLOC7479727 | Entrez gene ID : 7479727    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 2 3 3 2 3 3 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO:0030891 [list] [network] VCB complex  (3 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0004518 [list] [network] nuclease activity  (238 genes)  IEA  
Protein XP_002300754.1 [sequence] [blastp]
XP_024451809.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_002300754.1)
chlo 8,  vacu 1  (predict for XP_024451809.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_002300754.1)
other 4,  chlo 3  (predict for XP_024451809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479727
ppo-r.4
for
7479727
ppo-m.4
for
7479727
ppo-u.5
for
18099114
gma-u.5
for
100807950
gma-u.5
for
100775199
gma-u.5
for
100801243
mtr-u.5
for
25482175
mtr-u.5
for
25490215
mtr-u.5
for
11425357
ath-u.5
for
AT5G66050
ath-u.5
for
AT1G19660
ath-u.5
for
BBD1
bra-r.6
for
103872767
bra-r.6
for
103852946
bra-r.6
for
103837664
vvi-u.5
for
100855103
vvi-u.5
for
100855204
ghi-r.1
for
107943432
ghi-r.1
for
107905451
ghi-r.1
for
107910198
bna-r.1
for
106392234
bna-r.1
for
106397218
bna-r.1
for
106414994
cit-r.1
for
102607680
cit-r.1
for
102622452
sly-u.5
for
101263903
sly-u.5
for
101247280
sly-u.5
for
101247196
sot-r.1
for
102579692
sot-r.1
for
102591631
sot-r.1
for
102600753
nta-r.1
for
107795746
nta-r.1
for
107790732
nta-r.1
for
107799725
osa-u.5
for
4326932
osa-u.5
for
4345362
zma-u.5
for
103652143
zma-u.5
for
103634274
zma-u.5
for
100280101
tae-r.2
for
123146876
tae-r.2
for
123139254
tae-r.2
for
123164920
hvu-r.1
for
123407505
hvu-r.1
for
123404035
sbi-r.1
for
110429846
sbi-r.1
for
110436962
bdi-r.1
for
100846274
bdi-r.1
for
100830958
cre-r.1
for
CHLRE_16g688302v5


Ortholog ID: 2106
Species ppo ppo gma gma gma mtr mtr mtr ath ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC7479727 LOC18099114 LOC100807950 LOC100775199 LOC100801243 LOC25482175 LOC25490215 LOC11425357 AT5G66050 AT1G19660 BBD1 LOC103872767 LOC103852946 LOC103837664 LOC100855103 LOC100855204 LOC107943432 LOC107910198 LOC107895571 LOC106397218 LOC106414994 LOC106362746 LOC102607680 LOC102622452 LOC101263903 LOC101247280 LOC101247196 LOC102579692 LOC102591631 LOC102600753 LOC107795746 LOC107808046 LOC107783561 LOC4326932 LOC4345362 LOC103652143 LOC103634274 LOC100280101 LOC123146876 LOC123139254 LOC123145967 LOC123407505 LOC123404035 LOC110429846 LOC110436962 LOC100846274 LOC100830958 CHLRE_16g688302v5
Function* bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 1 bifunctional nuclease 2 Wound-responsive family protein Wound-responsive family protein bifunctional nuclease in basal defense response 1 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 1-like bifunctional nuclease 2 bifunctional nuclease 2-like bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease 1-like bifunctional nuclease 2 bifunctional nuclease 2-like bifunctional nuclease 2 bifunctional nuclease 2 bifunctional nuclease 1-like bifunctional nuclease 2-like bifunctional nuclease 2 bifunctional nuclease 2 uncharacterized LOC100280101 bifunctional nuclease 2 bifunctional nuclease bifunctional nuclease 1 bifunctional nuclease 2 bifunctional nuclease-like bifunctional nuclease 1-like bifunctional nuclease 2 bifunctional nuclease 1 bifunctional nuclease 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 4
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ppo00999 Biosynthesis of various plant secondary metabolites 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
mtr00562 Inositol phosphate metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00100 Steroid biosynthesis 2
sot00561 Glycerolipid metabolism 2
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 7
tae01200 Carbon metabolism 7
tae00260 Glycine, serine and threonine metabolism 6
tae01230 Biosynthesis of amino acids 6
tae01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00730 Thiamine metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7479727 18099114 100807950 100775199 100801243 25482175 25490215 11425357 836735 838553 843874 103872767 103852946 103837664 100855103 100855204 107943432 107910198 107895571 106397218 106414994 106362746 102607680 102622452 101263903 101247280 101247196 102579692 102591631 102600753 107795746 107808046 107783561 4326932 4345362 103652143 103634274 100280101 123146876 123139254 123145967 123407505 123404035 110429846 110436962 100846274 100830958 5724399
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