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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7492899   clp protease adapter protein ClpF, chloroplastic 
 ppo-r.4   7492899   clp protease adapter protein ClpF, chloroplastic 
 gma-u.5   100794023   clp protease adapter protein ClpF, chloroplastic 
 gma-u.5   100783767   clp protease adapter protein ClpF, chloroplastic 
 mtr-u.5   11408922   clp protease adapter protein ClpF, chloroplastic 
 ath-u.5   AT2G03390   uvrB/uvrC motif-containing protein 
 bra-r.6   103875431   clp protease adapter protein ClpF, chloroplastic 
 vvi-u.5   100266199   clp protease adapter protein ClpF, chloroplastic 
 ghi-r.1   107920449   clp protease adapter protein ClpF, chloroplastic 
 ghi-r.1   121225045   clp protease adapter protein ClpF, chloroplastic 
 bna-r.1   106346462   clp protease adapter protein ClpF, chloroplastic-like 
 cit-r.1   102619019   clp protease adapter protein ClpF, chloroplastic 
 sly-u.5   101251088   clp protease adapter protein ClpF, chloroplastic 
 sot-r.1   102591795   uncharacterized LOC102591795 
 sot-r.1   102605078   uncharacterized LOC102605078 
 nta-r.1   107778109   clp protease adapter protein ClpF, chloroplastic 
 osa-u.5   4344777   clp protease adapter protein ClpF, chloroplastic 
 osa-u.5   9269022   clp protease adapter protein ClpF, chloroplastic 
 zma-u.5   100280211   uncharacterized LOC100280211 
 tae-r.2   123070880   clp protease adapter protein ClpF, chloroplastic 
 tae-r.2   123079268   clp protease adapter protein ClpF, chloroplastic 
 tae-r.2   123062153   clp protease adapter protein ClpF, chloroplastic 
 hvu-r.1   123444488   clp protease adapter protein ClpF, chloroplastic 
 sbi-r.1   110433517   clp protease adapter protein ClpF, chloroplastic 
 bdi-r.1   100832648   clp protease adapter protein ClpF, chloroplastic 
 cre-r.1   CHLRE_02g113700v5   uncharacterized protein 

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Top 50 coexpressed genes to 7492899 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7492899 (ppo-u.5 coexpression data)

CoexMap"7492899"


ppoLOC7492899 | Entrez gene ID : 7492899    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 1 1 2 1 1 1 2 1 2 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_052312765.1 [sequence] [blastp]
XP_052312766.1 [sequence] [blastp]
XP_052312767.1 [sequence] [blastp]
XP_052312768.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_052312765.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_052312766.1)
chlo 9  (predict for XP_052312767.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_052312768.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_052312765.1)
chlo 3  (predict for XP_052312766.1)
chlo 3  (predict for XP_052312767.1)
chlo 3  (predict for XP_052312768.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7492899
ppo-r.4
for
7492899
gma-u.5
for
100794023
gma-u.5
for
100783767
mtr-u.5
for
11408922
ath-u.5
for
AT2G03390
bra-r.6
for
103875431
vvi-u.5
for
100266199
ghi-r.1
for
107920449
ghi-r.1
for
121225045
bna-r.1
for
106346462
cit-r.1
for
102619019
sly-u.5
for
101251088
sot-r.1
for
102591795
sot-r.1
for
102605078
nta-r.1
for
107778109
osa-u.5
for
4344777
osa-u.5
for
9269022
zma-u.5
for
100280211
tae-r.2
for
123070880
tae-r.2
for
123079268
tae-r.2
for
123062153
hvu-r.1
for
123444488
sbi-r.1
for
110433517
bdi-r.1
for
100832648
cre-r.1
for
CHLRE_02g113700v5


Ortholog ID: 9375
Species ppo gma gma mtr ath bra vvi ghi ghi bna cit sly sot sot nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC7492899 LOC100794023 LOC100783767 LOC11408922 AT2G03390 LOC103875431 LOC100266199 LOC107920449 LOC121225045 LOC106346462 LOC102619019 LOC101251088 LOC102591795 LOC102605078 LOC107778109 LOC4344777 LOC9269022 LOC100280211 LOC123070880 LOC123079268 LOC123062153 LOC123444488 LOC110433517 LOC100832648 CHLRE_02g113700v5
Function* clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic uvrB/uvrC motif-containing protein clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic-like clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic uncharacterized LOC102591795 uncharacterized LOC102605078 clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic uncharacterized LOC100280211 clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic clp protease adapter protein ClpF, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 4
ghi00380 Tryptophan metabolism 4
ghi00040 Pentose and glucuronate interconversions 2
ghi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 4
ghi00380 Tryptophan metabolism 4
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 2
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00790 Folate biosynthesis 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00480 Glutathione metabolism 3
tae00790 Folate biosynthesis 3
tae00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7492899 100794023 100783767 11408922 814868 103875431 100266199 107920449 121225045 106346462 102619019 101251088 102591795 102605078 107778109 4344777 9269022 100280211 123070880 123079268 123062153 123444488 110433517 100832648 5725448
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