ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-r.6	101259871	probable ascorbate-specific transmembrane electron transporter 1
sly-u.5	101259871	probable ascorbate-specific transmembrane electron transporter 1
sly-u.5	104647295	probable transmembrane ascorbate ferrireductase 4
sly-u.5	101249610	transmembrane ascorbate ferrireductase 1
sly-u.5	101256550	transmembrane ascorbate ferrireductase 2
sot-r.1	102605721	probable transmembrane ascorbate ferrireductase 3
sot-r.1	102602133	probable transmembrane ascorbate ferrireductase 2
sot-r.1	102598463	probable ascorbate-specific transmembrane electron transporter 1
nta-r.1	107823873	putative transmembrane ascorbate ferrireductase 4
nta-r.1	107800005	putative ascorbate-specific transmembrane electron transporter 1
ath-u.5	ACYB-2	Cytochrome b561/ferric reductase transmembrane protein family
ath-u.5	CYB-1	cytochrome B561-1
ath-u.5	AT1G14730	Cytochrome b561/ferric reductase transmembrane protein family
gma-u.5	100306179	putative transmembrane ascorbate ferrireductase
gma-u.5	100527259	uncharacterized LOC100527259
bra-r.6	103842947	probable transmembrane ascorbate ferrireductase 3
bra-r.6	103863794	probable transmembrane ascorbate ferrireductase 2
vvi-u.5	100264480	probable transmembrane ascorbate ferrireductase 4
ppo-u.5	7459093	probable transmembrane ascorbate ferrireductase 3
ppo-u.5	7483923	uncharacterized LOC7483923
ppo-u.5	18107405	transmembrane ascorbate ferrireductase 2
mtr-u.5	11428735	probable transmembrane ascorbate ferrireductase 4
ghi-r.1	107917745	transmembrane ascorbate ferrireductase 1
ghi-r.1	107918873	probable transmembrane ascorbate ferrireductase 3
bna-r.1	106361856	probable transmembrane ascorbate ferrireductase 4
bna-r.1	106410939	transmembrane ascorbate ferrireductase 1
bna-r.1	106412196	probable transmembrane ascorbate ferrireductase 4
cit-r.1	102608192	transmembrane ascorbate ferrireductase 1
cit-r.1	102624702	transmembrane ascorbate ferrireductase 2
cit-r.1	102616642	probable transmembrane ascorbate ferrireductase 3
osa-u.5	4349055	probable ascorbate-specific transmembrane electron transporter 1
osa-u.5	4330125	probable ascorbate-specific transmembrane electron transporter 1
osa-u.5	4344421	ascorbate-specific transmembrane electron transporter 1
zma-u.5	100382018	uncharacterized LOC100382018
zma-u.5	100194390	uncharacterized LOC100194390
zma-u.5	100384594	Ascorbate-specific transmembrane electron transporter 2
hvu-r.1	123433623	probable ascorbate-specific transmembrane electron transporter 1
hvu-r.1	123441055	probable ascorbate-specific transmembrane electron transporter 1
hvu-r.1	123427342	probable ascorbate-specific transmembrane electron transporter 2
sbi-r.1	8083614	probable ascorbate-specific transmembrane electron transporter 1
sbi-r.1	8073513	probable transmembrane ascorbate ferrireductase 2
sbi-r.1	8075175	ascorbate-specific transmembrane electron transporter 1
bdi-r.1	112268589	probable ascorbate-specific transmembrane electron transporter 1
bdi-r.1	100845313	probable ascorbate-specific transmembrane electron transporter 1
cre-r.1	CHLRE_13g586600v5	uncharacterized protein

Top 50 coexpressed genes to 101259871 (sly-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101259871 (sly-r.6 coexpression data)

CoexMap"101259871"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016491 [list] [network] oxidoreductase activity

(1359 genes)

IEA

Protein

XP_004228748.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, vacu 3, E.R. 1, cysk_plas 1, cyto_plas 1

(predict for XP_004228748.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_004228748.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-r.6 for 101259871	sly-u.5 for 101259871	sly-u.5 for 104647295	sly-u.5 for 101249610	sly-u.5 for 101256550	sot-r.1 for 102605721	sot-r.1 for 102602133	sot-r.1 for 102598463	nta-r.1 for 107823873	nta-r.1 for 107800005	ath-u.5 for ACYB-2	ath-u.5 for CYB-1	ath-u.5 for AT1G14730	gma-u.5 for 100306179	gma-u.5 for 100527259	bra-r.6 for 103842947	bra-r.6 for 103863794	vvi-u.5 for 100264480	ppo-u.5 for 7459093	ppo-u.5 for 7483923	ppo-u.5 for 18107405	mtr-u.5 for 11428735	ghi-r.1 for 107917745	ghi-r.1 for 107918873	bna-r.1 for 106361856	bna-r.1 for 106410939	bna-r.1 for 106412196	cit-r.1 for 102608192	cit-r.1 for 102624702	cit-r.1 for 102616642	osa-u.5 for 4349055	osa-u.5 for 4330125	osa-u.5 for 4344421	zma-u.5 for 100382018	zma-u.5 for 100194390	zma-u.5 for 100384594	hvu-r.1 for 123433623	hvu-r.1 for 123441055	hvu-r.1 for 123427342	sbi-r.1 for 8083614	sbi-r.1 for 8073513	sbi-r.1 for 8075175	bdi-r.1 for 112268589	bdi-r.1 for 100845313	cre-r.1 for CHLRE_13g586600v5

Ortholog

Ortholog ID: 380

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CYB-1

Function^*

probable ascorbate-specific transmembrane electron transporter 1

transmembrane ascorbate ferrireductase 1

probable ascorbate-specific transmembrane electron transporter 1

probable transmembrane ascorbate ferrireductase 4

putative transmembrane ascorbate ferrireductase 4

putative ascorbate-specific transmembrane electron transporter 1

transmembrane ascorbate ferrireductase 1

cytochrome B561-1

Cytochrome b561/ferric reductase transmembrane protein family

putative transmembrane ascorbate ferrireductase

probable transmembrane ascorbate ferrireductase 2

uncharacterized LOC100305990

probable transmembrane ascorbate ferrireductase 4

transmembrane ascorbate ferrireductase 1

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 4

transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 3

uncharacterized LOC7483923

transmembrane ascorbate ferrireductase 2

transmembrane ascorbate ferrireductase 1

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 4

transmembrane ascorbate ferrireductase 2-like

probable transmembrane ascorbate ferrireductase 4

transmembrane ascorbate ferrireductase 1

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 4

ascorbate-specific transmembrane electron transporter 1

probable transmembrane ascorbate ferrireductase 2

probable ascorbate-specific transmembrane electron transporter 1

uncharacterized LOC100382018

probable transmembrane ascorbate ferrireductase 3

probable ascorbate-specific transmembrane electron transporter 1

probable ascorbate-specific transmembrane electron transporter 2

transmembrane ascorbate ferrireductase 2

probable ascorbate-specific transmembrane electron transporter 2

transmembrane ascorbate ferrireductase 2

probable ascorbate-specific transmembrane electron transporter 1

probable transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 3

probable ascorbate-specific transmembrane electron transporter 2

probable ascorbate-specific transmembrane electron transporter 1

probable ascorbate-specific transmembrane electron transporter 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath00510	N-Glycan biosynthesis	4
ath00513	Various types of N-glycan biosynthesis	4
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00541	Biosynthesis of various nucleotide sugars	2
ath01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma00010	Glycolysis / Gluconeogenesis	3
gma01200	Carbon metabolism	3
gma01230	Biosynthesis of amino acids	3
gma00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4
gma04145	Phagosome	4
gma03060	Protein export	3
gma04141	Protein processing in endoplasmic reticulum	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	4
vvi04142	Lysosome	3
vvi04145	Phagosome	3
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo03060	Protein export	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	3
mtr00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	8
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	8
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa04144	Endocytosis	3
osa00510	N-Glycan biosynthesis	3
osa00513	Various types of N-glycan biosynthesis	3
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2
tae00053	Ascorbate and aldarate metabolism	2
tae00071	Fatty acid degradation	2
tae00280	Valine, leucine and isoleucine degradation	2
tae00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	5
sbi00941	Flavonoid biosynthesis	4
sbi00944	Flavone and flavonol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
sbi01230	Biosynthesis of amino acids	7
sbi00940	Phenylpropanoid biosynthesis	4
sbi00360	Phenylalanine metabolism	2
sbi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00480	Glutathione metabolism	3
cre00590	Arachidonic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

101259871

101249610

102598463

102580353

107823873

107794224

107831838

833853

838038

839151

100306179

100787570

100305990

103835470

103861573

103872268

100264480

100251417

100244034

7459093

7483923

18107405

25485075

120577297

25495590

107918873

107953960

107934211

106361856

106445892

106361920

102608192

102616642

102618261

4344421

4345447

4347995

100382018

103643908

103654438

123127843

123189786

123154978

123427342

123413567

123403850

8073513

8060006

110436204

112268589

100845313

104583522

66056045

The preparation time of this page was 0.4 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	hvu	sbi	bdi	cre	tae
Paralog	5	3	2	3	2	2	1	3	1	2	3	3	3	3	3	3	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101259871 (sly-r.6 coexpression data)

Top 50 enrichment test to 101259871 (sly-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**