ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8075175	ascorbate-specific transmembrane electron transporter 1
sbi-r.1	8065194	probable ascorbate-specific transmembrane electron transporter 1
sbi-r.1	8060006	probable transmembrane ascorbate ferrireductase 3
sbi-r.1	8083614	probable ascorbate-specific transmembrane electron transporter 1
zma-u.5	103643908	probable transmembrane ascorbate ferrireductase 3
zma-u.5	100382018	uncharacterized LOC100382018
zma-u.5	100273232	cytochrome b561
osa-u.5	4336503	probable ascorbate-specific transmembrane electron transporter 2
osa-u.5	4347995	probable ascorbate-specific transmembrane electron transporter 1
osa-u.5	4345447	probable transmembrane ascorbate ferrireductase 2
tae-r.2	123137606	probable ascorbate-specific transmembrane electron transporter 1
hvu-r.1	123433623	probable ascorbate-specific transmembrane electron transporter 1
hvu-r.1	123427342	probable ascorbate-specific transmembrane electron transporter 2
hvu-r.1	123413567	transmembrane ascorbate ferrireductase 2
bdi-r.1	100824001	probable transmembrane ascorbate ferrireductase 2
bdi-r.1	100842611	probable ascorbate-specific transmembrane electron transporter 2
ath-u.5	ACYB-2	Cytochrome b561/ferric reductase transmembrane protein family
ath-u.5	CYB-1	cytochrome B561-1
ath-u.5	AT1G14730	Cytochrome b561/ferric reductase transmembrane protein family
gma-u.5	100787570	probable transmembrane ascorbate ferrireductase 2
sly-u.5	101256550	transmembrane ascorbate ferrireductase 2
sly-u.5	101259871	probable ascorbate-specific transmembrane electron transporter 1
bra-r.6	103861573	transmembrane ascorbate ferrireductase 1
bra-r.6	103842947	probable transmembrane ascorbate ferrireductase 3
bra-r.6	103863794	probable transmembrane ascorbate ferrireductase 2
vvi-u.5	100251417	transmembrane ascorbate ferrireductase 2
vvi-u.5	100244034	probable transmembrane ascorbate ferrireductase 3
vvi-u.5	100255839	transmembrane ascorbate ferrireductase 1
ppo-u.5	7483923	uncharacterized LOC7483923
ppo-u.5	7474042	transmembrane ascorbate ferrireductase 1
ppo-u.5	18107405	transmembrane ascorbate ferrireductase 2
mtr-u.5	120577297	probable transmembrane ascorbate ferrireductase 3
mtr-u.5	11428735	probable transmembrane ascorbate ferrireductase 4
ghi-r.1	107917745	transmembrane ascorbate ferrireductase 1
ghi-r.1	107918873	probable transmembrane ascorbate ferrireductase 3
bna-r.1	106361856	probable transmembrane ascorbate ferrireductase 4
sot-r.1	102605721	probable transmembrane ascorbate ferrireductase 3
sot-r.1	102602133	probable transmembrane ascorbate ferrireductase 2
sot-r.1	102598463	probable ascorbate-specific transmembrane electron transporter 1
cit-r.1	102616642	probable transmembrane ascorbate ferrireductase 3
cit-r.1	102624702	transmembrane ascorbate ferrireductase 2
cit-r.1	102618261	probable transmembrane ascorbate ferrireductase 4
nta-r.1	107794368	transmembrane ascorbate ferrireductase 2
nta-r.1	107800005	putative ascorbate-specific transmembrane electron transporter 1
nta-r.1	107810127	putative transmembrane ascorbate ferrireductase 3
cre-r.1	CHLRE_13g586600v5	uncharacterized protein

Top 50 coexpressed genes to 8075175 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8075175 (sbi-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

ascorbate-specific transmembrane electron transporter 1

KEGG

GO BP

GO CC

GO MF

GO:0016491 [list] [network] oxidoreductase activity

(1434 genes)

IEA

Protein

XP_002452857.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, vacu 3, E.R. 1, golg 1, nucl_plas 1, cysk_plas 1, mito_plas 1, cyto_plas 1

(predict for XP_002452857.1)

Subcellular
localization
TargetP

scret 9, mito 5

(predict for XP_002452857.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8075175	sbi-r.1 for 8065194	sbi-r.1 for 8060006	sbi-r.1 for 8083614	zma-u.5 for 103643908	zma-u.5 for 100382018	zma-u.5 for 100273232	osa-u.5 for 4336503	osa-u.5 for 4347995	osa-u.5 for 4345447	tae-r.2 for 123137606	hvu-r.1 for 123433623	hvu-r.1 for 123427342	hvu-r.1 for 123413567	bdi-r.1 for 100824001	bdi-r.1 for 100842611	ath-u.5 for ACYB-2	ath-u.5 for CYB-1	ath-u.5 for AT1G14730	gma-u.5 for 100787570	sly-u.5 for 101256550	sly-u.5 for 101259871	bra-r.6 for 103861573	bra-r.6 for 103842947	bra-r.6 for 103863794	vvi-u.5 for 100251417	vvi-u.5 for 100244034	vvi-u.5 for 100255839	ppo-u.5 for 7483923	ppo-u.5 for 7474042	ppo-u.5 for 18107405	mtr-u.5 for 120577297	mtr-u.5 for 11428735	ghi-r.1 for 107917745	ghi-r.1 for 107918873	bna-r.1 for 106361856	sot-r.1 for 102605721	sot-r.1 for 102602133	sot-r.1 for 102598463	cit-r.1 for 102616642	cit-r.1 for 102624702	cit-r.1 for 102618261	nta-r.1 for 107794368	nta-r.1 for 107800005	nta-r.1 for 107810127	cre-r.1 for CHLRE_13g586600v5

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Ortholog

Ortholog ID: 380

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

CYB-1

Function^*

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 2

probable ascorbate-specific transmembrane electron transporter 2

probable transmembrane ascorbate ferrireductase 3

uncharacterized LOC100382018

probable ascorbate-specific transmembrane electron transporter 1

probable transmembrane ascorbate ferrireductase 2

ascorbate-specific transmembrane electron transporter 1

transmembrane ascorbate ferrireductase 2

probable ascorbate-specific transmembrane electron transporter 2

probable ascorbate-specific transmembrane electron transporter 1

probable ascorbate-specific transmembrane electron transporter 2

transmembrane ascorbate ferrireductase 2

probable ascorbate-specific transmembrane electron transporter 1

probable ascorbate-specific transmembrane electron transporter 2

cytochrome B561-1

Cytochrome b561/ferric reductase transmembrane protein family

probable transmembrane ascorbate ferrireductase 2

uncharacterized LOC100305990

putative transmembrane ascorbate ferrireductase

probable ascorbate-specific transmembrane electron transporter 1

transmembrane ascorbate ferrireductase 1

probable transmembrane ascorbate ferrireductase 4

probable transmembrane ascorbate ferrireductase 3

transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 4

uncharacterized LOC7483923

transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 2

transmembrane ascorbate ferrireductase 1

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 2

probable transmembrane ascorbate ferrireductase 4

transmembrane ascorbate ferrireductase 2-like

probable transmembrane ascorbate ferrireductase 4

probable ascorbate-specific transmembrane electron transporter 1

probable transmembrane ascorbate ferrireductase 4

probable transmembrane ascorbate ferrireductase 3

probable transmembrane ascorbate ferrireductase 4

transmembrane ascorbate ferrireductase 1

putative transmembrane ascorbate ferrireductase 4

putative ascorbate-specific transmembrane electron transporter 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	5
sbi00941	Flavonoid biosynthesis	4
sbi00944	Flavone and flavonol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
sbi01230	Biosynthesis of amino acids	7
sbi00940	Phenylpropanoid biosynthesis	4
sbi00360	Phenylalanine metabolism	2
sbi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa04144	Endocytosis	3
osa00510	N-Glycan biosynthesis	3
osa00513	Various types of N-glycan biosynthesis	3
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2
tae00053	Ascorbate and aldarate metabolism	2
tae00071	Fatty acid degradation	2
tae00280	Valine, leucine and isoleucine degradation	2
tae00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath00510	N-Glycan biosynthesis	4
ath00513	Various types of N-glycan biosynthesis	4
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00541	Biosynthesis of various nucleotide sugars	2
ath01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4
gma04145	Phagosome	4
gma03060	Protein export	3
gma04141	Protein processing in endoplasmic reticulum	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma00010	Glycolysis / Gluconeogenesis	3
gma01200	Carbon metabolism	3
gma01230	Biosynthesis of amino acids	3
gma00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	4
vvi04142	Lysosome	3
vvi04145	Phagosome	3
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo03060	Protein export	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	3
mtr00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	8
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	8
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00480	Glutathione metabolism	3
cre00590	Arachidonic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8060006

8073513

110436204

103643908

100382018

103654438

4347995

4345447

4344421

123154978

123189786

123127843

123427342

123413567

123403850

100845313

112268589

104583522

833853

838038

839151

100787570

100305990

100306179

101259871

101249610

103861573

103835470

103872268

100251417

100244034

100264480

7483923

18107405

7459093

120577297

25495590

25485075

107918873

107953960

107934211

106361856

106445892

106361920

102598463

102580353

102616642

102618261

102608192

107831838

107823873

107794224

66056045

The preparation time of this page was 0.3 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	1	3	2	3	1	2	3	3	3	2	2	1	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8075175 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8075175 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**