ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-r.6	101265027	uncharacterized LOC101265027
sly-u.5	101265027	uncharacterized LOC101265027
sly-u.5	101263296	uncharacterized LOC101263296
sot-r.1	102581828	myb-like protein A
sot-r.1	102594751	uncharacterized LOC102594751
nta-r.1	107832489	uncharacterized LOC107832489
nta-r.1	107761521	uncharacterized LOC107761521
nta-r.1	107776068	uncharacterized LOC107776068
ath-u.5	AT3G48800	Sterile alpha motif (SAM) domain-containing protein
ath-u.5	AT5G23680	Sterile alpha motif (SAM) domain-containing protein
gma-u.5	102661364	protein bicaudal C homolog 1
gma-u.5	102660352	protein bicaudal C homolog 1
gma-u.5	102664834	uncharacterized LOC102664834
bra-r.6	103873114	uncharacterized LOC103873114
bra-r.6	103874236	ankyrin repeat and SAM domain-containing protein 6
vvi-u.5	100242008	uncharacterized LOC100242008
vvi-u.5	100245808	uncharacterized LOC100245808
ppo-u.5	7454590	uncharacterized LOC7454590
ppo-u.5	7457568	uncharacterized LOC7457568
ppo-u.5	7482814	uncharacterized LOC7482814
mtr-u.5	11435920	protein bicaudal C homolog 1
mtr-u.5	25491154	uncharacterized LOC25491154
mtr-u.5	11442905	uncharacterized LOC11442905
ghi-r.1	121232028	protein bicaudal C homolog 1-A
ghi-r.1	107912068	protein bicaudal C homolog 1
ghi-r.1	107931461	uncharacterized LOC107931461
bna-r.1	111207477	ankyrin repeat and SAM domain-containing protein 3-like
bna-r.1	106347460	uncharacterized LOC106347460
bna-r.1	106430783	protein bicaudal C homolog 1-B-like
cit-r.1	102609782	hypothetical protein
cit-r.1	102629192	uncharacterized LOC102629192
osa-u.5	4334793	uncharacterized LOC4334793
zma-u.5	100281343	uncharacterized LOC100281343
zma-u.5	100284329	uncharacterized LOC100284329
tae-r.2	123087629	ankyrin repeat and SAM domain-containing protein 6
tae-r.2	123114308	ankyrin repeat and SAM domain-containing protein 6
tae-r.2	123123795	ankyrin repeat and SAM domain-containing protein 6
hvu-r.1	123395092	ankyrin repeat and SAM domain-containing protein 6-like
sbi-r.1	8061410	transcription factor Sox-1
bdi-r.1	100841811	ankyrin repeat and SAM domain-containing protein 6

Top 50 coexpressed genes to 101265027 (sly-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101265027 (sly-r.6 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

uncharacterized LOC101265027

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(3982 genes)

IEA

Protein

XP_004239573.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, extr 1

(predict for XP_004239573.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_004239573.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-r.6 for 101265027	sly-u.5 for 101265027	sly-u.5 for 101263296	sot-r.1 for 102581828	sot-r.1 for 102594751	nta-r.1 for 107832489	nta-r.1 for 107761521	nta-r.1 for 107776068	ath-u.5 for AT3G48800	ath-u.5 for AT5G23680	gma-u.5 for 102661364	gma-u.5 for 102660352	gma-u.5 for 102664834	bra-r.6 for 103873114	bra-r.6 for 103874236	vvi-u.5 for 100242008	vvi-u.5 for 100245808	ppo-u.5 for 7454590	ppo-u.5 for 7457568	ppo-u.5 for 7482814	mtr-u.5 for 11435920	mtr-u.5 for 25491154	mtr-u.5 for 11442905	ghi-r.1 for 121232028	ghi-r.1 for 107912068	ghi-r.1 for 107931461	bna-r.1 for 111207477	bna-r.1 for 106347460	bna-r.1 for 106430783	cit-r.1 for 102609782	cit-r.1 for 102629192	osa-u.5 for 4334793	zma-u.5 for 100281343	zma-u.5 for 100284329	tae-r.2 for 123087629	tae-r.2 for 123114308	tae-r.2 for 123123795	hvu-r.1 for 123395092	sbi-r.1 for 8061410	bdi-r.1 for 100841811

Please wait a moment.

Ortholog

Ortholog ID: 2735

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC101265027

uncharacterized LOC101263296

myb-like protein A

uncharacterized LOC102594751

uncharacterized LOC107832489

uncharacterized LOC107761521

uncharacterized LOC107776068

Sterile alpha motif (SAM) domain-containing protein

protein bicaudal C homolog 1

uncharacterized LOC100802147

uncharacterized LOC100789887

uncharacterized LOC103873114

ankyrin repeat and SAM domain-containing protein 6

protein bicaudal C homolog 1-A

uncharacterized LOC100242008

uncharacterized LOC100245808

uncharacterized LOC7454590

uncharacterized LOC7457568

uncharacterized LOC7481188

protein bicaudal C homolog 1

uncharacterized LOC25491154

uncharacterized LOC11442905

uncharacterized LOC107931461

protein bicaudal C homolog 1-A

ankyrin repeat and SAM domain-containing protein 6

ankyrin repeat and SAM domain-containing protein 3-like

protein bicaudal C homolog 1-B-like

ankyrin repeat and SAM domain-containing protein 6

hypothetical protein

uncharacterized LOC102629192

uncharacterized LOC4334793

uncharacterized LOC100281343

uncharacterized LOC100284329

ankyrin repeat and SAM domain-containing protein 6

ankyrin repeat and SAM domain-containing protein 6-like

transcription factor Sox-1

ankyrin repeat and SAM domain-containing protein 6

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot04626	Plant-pathogen interaction	2
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	4
nta03015	mRNA surveillance pathway	4
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	7
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2
mtr03420	Nucleotide excision repair	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

101265027

101263296

102581828

102594751

107832489

107761521

107776068

824041

832433

102660352

100802147

100789887

103873114

103874236

103874855

100242008

100245808

7454590

7457568

7481188

11435920

25491154

11442905

107931461

107949613

107886186

111207477

106430783

106348314

102609782

102629192

4334793

100281343

100284329

123087629

123114308

123123795

123395092

8061410

100841811

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	2	3	2	2	3	3	3	3	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101265027 (sly-r.6 coexpression data)

Top 50 enrichment test to 101265027 (sly-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**