ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123087629	ankyrin repeat and SAM domain-containing protein 6
tae-r.2	123114308	ankyrin repeat and SAM domain-containing protein 6
tae-r.2	123123795	ankyrin repeat and SAM domain-containing protein 6
hvu-r.1	123395092	ankyrin repeat and SAM domain-containing protein 6-like
bdi-r.1	100841811	ankyrin repeat and SAM domain-containing protein 6
osa-u.5	4334793	uncharacterized LOC4334793
zma-u.5	100281343	uncharacterized LOC100281343
zma-u.5	100284329	uncharacterized LOC100284329
sbi-r.1	8061410	transcription factor Sox-1
ath-u.5	AT3G48800	Sterile alpha motif (SAM) domain-containing protein
ath-u.5	AT5G23680	Sterile alpha motif (SAM) domain-containing protein
gma-u.5	102661364	protein bicaudal C homolog 1
gma-u.5	102660352	protein bicaudal C homolog 1
gma-u.5	102664834	uncharacterized LOC102664834
sly-u.5	101263296	uncharacterized LOC101263296
sly-u.5	101265027	uncharacterized LOC101265027
bra-r.6	103874855	protein bicaudal C homolog 1-A
bra-r.6	103873114	uncharacterized LOC103873114
vvi-u.5	100245808	uncharacterized LOC100245808
vvi-u.5	100242008	uncharacterized LOC100242008
ppo-u.5	7482814	uncharacterized LOC7482814
ppo-u.5	7481188	uncharacterized LOC7481188
ppo-u.5	7457568	uncharacterized LOC7457568
mtr-u.5	11435920	protein bicaudal C homolog 1
mtr-u.5	25491154	uncharacterized LOC25491154
mtr-u.5	11442905	uncharacterized LOC11442905
ghi-r.1	121219295	protein bicaudal C homolog 1-A
ghi-r.1	107886186	ankyrin repeat and SAM domain-containing protein 6
ghi-r.1	107912068	protein bicaudal C homolog 1
bna-r.1	111207477	ankyrin repeat and SAM domain-containing protein 3-like
bna-r.1	106348314	ankyrin repeat and SAM domain-containing protein 6
bna-r.1	106447571	protein bicaudal C homolog 1-A
sot-r.1	102581828	myb-like protein A
sot-r.1	102594751	uncharacterized LOC102594751
cit-r.1	102629192	uncharacterized LOC102629192
cit-r.1	102609782	hypothetical protein
nta-r.1	107776068	uncharacterized LOC107776068
nta-r.1	107832489	uncharacterized LOC107832489
nta-r.1	107761521	uncharacterized LOC107761521

Top 50 coexpressed genes to 123087629 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123087629 (tae-r.2 coexpression data)

CoexMap"123087629"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(16249 genes)

IEA

Protein

XP_044365606.1 [sequence] [blastp]
XP_044365607.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_044365606.1)
nucl 10	(predict for XP_044365607.1)

Subcellular
localization
TargetP

other 8	(predict for XP_044365606.1)
other 8	(predict for XP_044365607.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123087629	tae-r.2 for 123114308	tae-r.2 for 123123795	hvu-r.1 for 123395092	bdi-r.1 for 100841811	osa-u.5 for 4334793	zma-u.5 for 100281343	zma-u.5 for 100284329	sbi-r.1 for 8061410	ath-u.5 for AT3G48800	ath-u.5 for AT5G23680	gma-u.5 for 102661364	gma-u.5 for 102660352	gma-u.5 for 102664834	sly-u.5 for 101263296	sly-u.5 for 101265027	bra-r.6 for 103874855	bra-r.6 for 103873114	vvi-u.5 for 100245808	vvi-u.5 for 100242008	ppo-u.5 for 7482814	ppo-u.5 for 7481188	ppo-u.5 for 7457568	mtr-u.5 for 11435920	mtr-u.5 for 25491154	mtr-u.5 for 11442905	ghi-r.1 for 121219295	ghi-r.1 for 107886186	ghi-r.1 for 107912068	bna-r.1 for 111207477	bna-r.1 for 106348314	bna-r.1 for 106447571	sot-r.1 for 102581828	sot-r.1 for 102594751	cit-r.1 for 102629192	cit-r.1 for 102609782	nta-r.1 for 107776068	nta-r.1 for 107832489	nta-r.1 for 107761521

Ortholog

Ortholog ID: 2735

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

ankyrin repeat and SAM domain-containing protein 6

ankyrin repeat and SAM domain-containing protein 6-like

ankyrin repeat and SAM domain-containing protein 6

uncharacterized LOC4334793

uncharacterized LOC100281343

uncharacterized LOC100284329

transcription factor Sox-1

Sterile alpha motif (SAM) domain-containing protein

protein bicaudal C homolog 1

uncharacterized LOC100802147

uncharacterized LOC100789887

uncharacterized LOC101263296

uncharacterized LOC101265027

protein bicaudal C homolog 1-A

uncharacterized LOC103873114

ankyrin repeat and SAM domain-containing protein 6

uncharacterized LOC100245808

uncharacterized LOC100242008

uncharacterized LOC7481188

uncharacterized LOC7457568

uncharacterized LOC7454590

protein bicaudal C homolog 1

uncharacterized LOC25491154

uncharacterized LOC11442905

ankyrin repeat and SAM domain-containing protein 6

uncharacterized LOC107931461

protein bicaudal C homolog 1-A

ankyrin repeat and SAM domain-containing protein 3-like

ankyrin repeat and SAM domain-containing protein 6

protein bicaudal C homolog 1-B-like

myb-like protein A

uncharacterized LOC102594751

uncharacterized LOC102629192

hypothetical protein

uncharacterized LOC107776068

uncharacterized LOC107832489

uncharacterized LOC107761521

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	7
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2
mtr03420	Nucleotide excision repair	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot04626	Plant-pathogen interaction	2
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	4
nta03015	mRNA surveillance pathway	4
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

123087629

123114308

123123795

123395092

100841811

4334793

100281343

100284329

8061410

824041

832433

102660352

100802147

100789887

101263296

101265027

103874855

103873114

103874236

100245808

100242008

7481188

7457568

7454590

11435920

25491154

11442905

107886186

107931461

107949613

111207477

106348314

106430783

102581828

102594751

102629192

102609782

107776068

107832489

107761521

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Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	2	1	2	3	2	2	2	3	3	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123087629 (tae-r.2 coexpression data)

Top 50 enrichment test to 123087629 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**