Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6   kdsA   3-desoxy-D-manno octulosonic acid-8-phosphate synthase 
 sly-u.5   kdsA   3-desoxy-D-manno octulosonic acid-8-phosphate synthase 
 sly-m.5   kdsA   3-desoxy-D-manno octulosonic acid-8-phosphate synthase 
 sot-r.1   102602925   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 nta-r.1   107822777   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 nta-r.1   107762726   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 ath-u.5   ATKDSA2   Aldolase superfamily protein 
 ath-u.5   AtkdsA1   Aldolase-type TIM barrel family protein 
 gma-u.5   100810842   2-dehydro-3-deoxyphosphooctonate aldolase-like protein 
 gma-u.5   100809120   2-dehydro-3-deoxyphosphooctonate aldolase 
 bra-r.6   103853194   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 bra-r.6   103830480   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 vvi-u.5   100255394   2-dehydro-3-deoxyphosphooctonate aldolase 
 ppo-u.5   7468748   2-dehydro-3-deoxyphosphooctonate aldolase 
 ppo-u.5   7492498   2-dehydro-3-deoxyphosphooctonate aldolase 
 mtr-u.5   11437185   2-dehydro-3-deoxyphosphooctonate aldolase 
 ghi-r.1   107919019   2-dehydro-3-deoxyphosphooctonate aldolase 
 ghi-r.1   107913976   2-dehydro-3-deoxyphosphooctonate aldolase 
 bna-r.1   106406109   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 bna-r.1   125597827   2-dehydro-3-deoxyphosphooctonate aldolase 1-like 
 cit-r.1   102607815   2-dehydro-3-deoxyphosphooctonate aldolase 
 osa-u.5   4351779   2-dehydro-3-deoxyphosphooctonate aldolase 1 
 zma-u.5   100191165   2-dehydro-3-deoxyphosphooctonate aldolase 
 tae-r.2   123187424   2-dehydro-3-deoxyphosphooctonate aldolase 
 tae-r.2   123051502   2-dehydro-3-deoxyphosphooctonate aldolase 
 hvu-r.1   123424673   2-dehydro-3-deoxyphosphooctonate aldolase 
 sbi-r.1   110429722   2-dehydro-3-deoxyphosphooctonate aldolase 
 bdi-r.1   100832198   2-dehydro-3-deoxyphosphooctonate aldolase 

close


Top 50 coexpressed genes to kdsA (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to kdsA (sly-r.6 coexpression data)

CoexMap"543766"


slykdsA | Entrez gene ID : 543766      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 2 2 1 2 1 2 2 1 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00541 [list] [network] Biosynthesis of various nucleotide sugars (26 genes)
sly01250 [list] [network] Biosynthesis of nucleotide sugars (106 genes)
GO BP
GO:0046364 [list] [network] monosaccharide biosynthetic process  (19 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0008676 [list] [network] 3-deoxy-8-phosphooctulonate synthase activity  (1 genes)  IEA  
Protein NP_001233887.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1  (predict for NP_001233887.2)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for NP_001233887.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-r.6
for
kdsA
sly-u.5
for
kdsA
sly-m.5
for
kdsA
sot-r.1
for
102602925
nta-r.1
for
107822777
nta-r.1
for
107762726
ath-u.5
for
ATKDSA2
ath-u.5
for
AtkdsA1
gma-u.5
for
100810842
gma-u.5
for
100809120
bra-r.6
for
103853194
bra-r.6
for
103830480
vvi-u.5
for
100255394
ppo-u.5
for
7468748
ppo-u.5
for
7492498
mtr-u.5
for
11437185
ghi-r.1
for
107919019
ghi-r.1
for
107913976
bna-r.1
for
106406109
bna-r.1
for
125597827
cit-r.1
for
102607815
osa-u.5
for
4351779
zma-u.5
for
100191165
tae-r.2
for
123187424
tae-r.2
for
123051502
hvu-r.1
for
123424673
sbi-r.1
for
110429722
bdi-r.1
for
100832198


Ortholog ID: 8237
Species sly sot nta nta ath ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma tae tae hvu sbi bdi
Symbol kdsA LOC102602925 LOC107822777 LOC107762726 ATKDSA2 AtkdsA1 LOC100810842 LOC100809120 LOC103853194 LOC103830480 LOC100255394 LOC7468748 LOC7492498 LOC11437185 LOC107919019 LOC107913976 LOC106406109 LOC125597827 LOC106381509 LOC102607815 LOC4351779 LOC100191165 LOC123187424 LOC123051502 LOC123424673 LOC110429722 LOC100832198
Function* 3-desoxy-D-manno octulosonic acid-8-phosphate synthase 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 1 Aldolase superfamily protein Aldolase-type TIM barrel family protein 2-dehydro-3-deoxyphosphooctonate aldolase-like protein 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 1-like 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 1 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase 2-dehydro-3-deoxyphosphooctonate aldolase
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00061 Fatty acid biosynthesis 5
sly01212 Fatty acid metabolism 5
sly01240 Biosynthesis of cofactors 5
sly01200 Carbon metabolism 3
sly00780 Biotin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot00300 Lysine biosynthesis 2
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 3
ath01250 Biosynthesis of nucleotide sugars 3
ath00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01250 Biosynthesis of nucleotide sugars 4
ath00541 Biosynthesis of various nucleotide sugars 3
ath00561 Glycerolipid metabolism 2
ath01232 Nucleotide metabolism 2
ath00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 3
bra00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra04814 Motor proteins 2
bra00541 Biosynthesis of various nucleotide sugars 2
bra01250 Biosynthesis of nucleotide sugars 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01250 Biosynthesis of nucleotide sugars 3
ppo01200 Carbon metabolism 3
ppo00010 Glycolysis / Gluconeogenesis 3
ppo01230 Biosynthesis of amino acids 3
ppo00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01250 Biosynthesis of nucleotide sugars 4
ppo00541 Biosynthesis of various nucleotide sugars 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00300 Lysine biosynthesis 5
osa00220 Arginine biosynthesis 3
osa00250 Alanine, aspartate and glutamate metabolism 3
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma03010 Ribosome 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 6
tae00270 Cysteine and methionine metabolism 4
tae01200 Carbon metabolism 4
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 8
tae00541 Biosynthesis of various nucleotide sugars 4
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi00061 Fatty acid biosynthesis 3
sbi00541 Biosynthesis of various nucleotide sugars 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 543766 102602925 107822777 107762726 838203 844288 100810842 100809120 103853194 103830480 100255394 7468748 7492498 11437185 107919019 107913976 106406109 125597827 106381509 102607815 4351779 100191165 123187424 123051502 123424673 110429722 100832198
The preparation time of this page was 0.3 [sec].