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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246899   putative pentatricopeptide repeat-containing protein At5g37570 
 sly-r.6   101246899   putative pentatricopeptide repeat-containing protein At5g37570 
 sot-r.1   102600052   putative pentatricopeptide repeat-containing protein At3g23330 
 nta-r.1   107798132   pentatricopeptide repeat-containing protein At5g27110-like 
 gma-u.5   102664309   putative pentatricopeptide repeat-containing protein At3g23330 
 gma-u.5   102659979   putative pentatricopeptide repeat-containing protein At3g23330 
 vvi-u.5   100265089   putative pentatricopeptide repeat-containing protein At3g23330 
 ghi-r.1   107907754   pentatricopeptide repeat-containing protein At4g21065 
 osa-u.5   4342804   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   103632150   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 tae-r.2   123187663   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 tae-r.2   123051749   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 
 tae-r.2   123043876   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sbi-r.1   8081482   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 bdi-r.1   100846027   pentatricopeptide repeat-containing protein At2g22070 

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Top 50 coexpressed genes to 101246899 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246899 (sly-u.5 coexpression data)

CoexMap""


slyLOC101246899 | Entrez gene ID : 101246899      
Species sly sot nta gma vvi ghi osa zma tae sbi bdi cit hvu mtr ath bra cre bna ppo
Paralog 2 1 1 2 1 1 1 1 3 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function putative pentatricopeptide repeat-containing protein At5g37570
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_025886084.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  vacu 1,  cyto 1,  extr 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  cyto_E.R. 1  (predict for XP_025886084.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_025886084.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246899
sly-r.6
for
101246899
sot-r.1
for
102600052
nta-r.1
for
107798132
gma-u.5
for
102664309
gma-u.5
for
102659979
vvi-u.5
for
100265089
ghi-r.1
for
107907754
osa-u.5
for
4342804
zma-u.5
for
103632150
tae-r.2
for
123187663
tae-r.2
for
123051749
tae-r.2
for
123043876
sbi-r.1
for
8081482
bdi-r.1
for
100846027

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Ortholog ID: 12795
Species sly sot nta gma gma vvi ghi osa zma tae tae tae sbi bdi
Symbol LOC101246899 LOC102600052 LOC107798132 LOC102664309 LOC102659979 LOC100265089 LOC107907754 LOC4342804 LOC103632150 LOC123187663 LOC123051749 LOC123043876 LOC8081482 LOC100846027
Function* putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At5g27110-like putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g22070
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101246899 102600052 107798132 102664309 102659979 100265089 107907754 4342804 103632150 123187663 123051749 123043876 8081482 100846027
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