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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4342804   pentatricopeptide repeat-containing protein At4g21065 
 osa-r.6   4342804   pentatricopeptide repeat-containing protein At4g21065 
 osa-m.8   4342804   pentatricopeptide repeat-containing protein At4g21065 
 osa-e.1   4342804   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   103632150   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 gma-u.5   102659979   putative pentatricopeptide repeat-containing protein At3g23330 
 gma-u.5   102664309   putative pentatricopeptide repeat-containing protein At3g23330 
 sly-u.5   101246899   putative pentatricopeptide repeat-containing protein At5g37570 
 vvi-u.5   100265089   putative pentatricopeptide repeat-containing protein At3g23330 

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Top 50 coexpressed genes to 4342804 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4342804 (osa-u.5 coexpression data)

CoexMap"4342804"


osaLOC4342804 | Entrez gene ID : 4342804      
Species osa zma gma sly vvi tae mtr hvu ath ghi bdi cit bra cre sbi ppo bna nta sot
Paralog 4 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015645237.1 [sequence] [blastp]
XP_015645238.1 [sequence] [blastp]
XP_015645241.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_015645237.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_015645238.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_015645241.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for XP_015645237.1)
mito 8,  chlo 3  (predict for XP_015645238.1)
mito 8,  chlo 3  (predict for XP_015645241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4342804

.
osa-r.6
for
4342804

.
osa-m.8
for
4342804

.
osa-e.1
for
4342804

.
zma-u.5
for
103632150

.
gma-u.5
for
102659979

.
gma-u.5
for
102664309

.
sly-u.5
for
101246899

.
vvi-u.5
for
100265089

.


Ortholog ID: 12795
Species gma gma sly osa zma vvi tae tae ghi sbi sot bdi nta
Symbol LOC102664309 LOC102659979 LOC101246899 LOC4342804 LOC103632150 LOC100265089 LOC123043876 LOC123187663 LOC107907754 LOC8081482 LOC102600052 LOC100846027 LOC107798132
Function* putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At5g37570 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g24000, mitochondrial putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g24000, mitochondrial putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At2g22070 pentatricopeptide repeat-containing protein At5g27110-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102664309 102659979 101246899 4342804 103632150 100265089 123043876 123187663 107907754 8081482 102600052 100846027 107798132
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