Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101253003   protein THYLAKOID FORMATION1, chloroplastic 
 sly-r.6   101253003   protein THYLAKOID FORMATION1, chloroplastic 
 sly-m.5   101253003   protein THYLAKOID FORMATION1, chloroplastic 
 sot-r.1   THF1   light-regulated chloroplast-localized protein 
 nta-r.1   107808613   protein THYLAKOID FORMATION1, chloroplastic-like 
 nta-r.1   107776485   protein THYLAKOID FORMATION1, chloroplastic 
 ath-u.5   PSB29   photosystem II reaction center PSB29 protein 
 gma-u.5   100796767   protein THYLAKOID FORMATION1, chloroplastic 
 gma-u.5   100792508   protein THYLAKOID FORMATION1, chloroplastic 
 gma-u.5   100779964   protein THYLAKOID FORMATION1, chloroplastic 
 bra-r.6   103842574   protein THYLAKOID FORMATION 1, chloroplastic 
 vvi-u.5   100259646   protein THYLAKOID FORMATION1, chloroplastic 
 ppo-u.5   7494440   protein THYLAKOID FORMATION1, chloroplastic 
 ppo-u.5   7494227   protein THYLAKOID FORMATION1, chloroplastic 
 mtr-u.5   25487573   protein THYLAKOID FORMATION1, chloroplastic 
 mtr-u.5   25492064   protein THYLAKOID FORMATION1, chloroplastic 
 ghi-r.1   107898931   protein THYLAKOID FORMATION1, chloroplastic 
 ghi-r.1   107948994   protein THYLAKOID FORMATION1, chloroplastic 
 bna-r.1   106368798   protein THYLAKOID FORMATION 1, chloroplastic 
 bna-r.1   106415074   protein THYLAKOID FORMATION 1, chloroplastic 
 cit-r.1   102609819   protein THYLAKOID FORMATION1, chloroplastic 
 osa-u.5   4343584   protein THYLAKOID FORMATION1, chloroplastic-like 
 zma-u.5   100382672   Protein THYLAKOID FORMATION 1 chloroplastic 
 zma-u.5   100193314   chloroplast-localized Ptr ToxA-binding protein 1 
 tae-r.2   123188272   protein THYLAKOID FORMATION1, chloroplastic 
 tae-r.2   123044553   protein THYLAKOID FORMATION1, chloroplastic 
 tae-r.2   543119   protein THYLAKOID FORMATION1, chloroplastic 
 hvu-r.1   123425712   protein THYLAKOID FORMATION1, chloroplastic 
 sbi-r.1   8056327   protein THYLAKOID FORMATION1, chloroplastic 
 bdi-r.1   100839581   protein THYLAKOID FORMATION1, chloroplastic 
 cre-r.1   CHLRE_13g562850v5   uncharacterized protein 

close


Top 50 coexpressed genes to 101253003 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101253003 (sly-u.5 coexpression data)

CoexMap"101253003"


slyLOC101253003 | Entrez gene ID : 101253003    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 3 1 1 2 2 2 2 1 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045038 [list] [network] protein import into chloroplast thylakoid membrane  (1 genes)  IEA  
GO:0045037 [list] [network] protein import into chloroplast stroma  (5 genes)  IEA  
GO:0010207 [list] [network] photosystem II assembly  (6 genes)  IEA  
GO:0010027 [list] [network] thylakoid membrane organization  (11 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (101 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (145 genes)  IEA  
GO MF
Protein XP_004243305.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_004243305.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004243305.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101253003
sly-r.6
for
101253003
sly-m.5
for
101253003
sot-r.1
for
THF1
nta-r.1
for
107808613
nta-r.1
for
107776485
ath-u.5
for
PSB29
gma-u.5
for
100796767
gma-u.5
for
100792508
gma-u.5
for
100779964
bra-r.6
for
103842574
vvi-u.5
for
100259646
ppo-u.5
for
7494440
ppo-u.5
for
7494227
mtr-u.5
for
25487573
mtr-u.5
for
25492064
ghi-r.1
for
107898931
ghi-r.1
for
107948994
bna-r.1
for
106368798
bna-r.1
for
106415074
cit-r.1
for
102609819
osa-u.5
for
4343584
zma-u.5
for
100382672
zma-u.5
for
100193314
tae-r.2
for
123188272
tae-r.2
for
123044553
tae-r.2
for
543119
hvu-r.1
for
123425712
sbi-r.1
for
8056327
bdi-r.1
for
100839581
cre-r.1
for
CHLRE_13g562850v5


Ortholog ID: 7510
Species sly sot nta nta ath gma gma gma bra vvi ppo ppo mtr mtr ghi ghi bna bna cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC101253003 THF1 LOC107808613 LOC107776485 PSB29 LOC100796767 LOC100779964 LOC100814341 LOC103842574 LOC100259646 LOC7494440 LOC7494227 LOC25487573 LOC25492064 LOC107898931 LOC107948994 LOC106368798 LOC106415074 LOC102609819 LOC4343584 LOC100382672 LOC100193314 LOC123188272 LOC123044553 LOC543119 LOC123425712 LOC8056327 LOC100839581 CHLRE_13g562850v5
Function* protein THYLAKOID FORMATION1, chloroplastic light-regulated chloroplast-localized protein protein THYLAKOID FORMATION1, chloroplastic-like protein THYLAKOID FORMATION1, chloroplastic photosystem II reaction center PSB29 protein protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION 1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION 1, chloroplastic protein THYLAKOID FORMATION 1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic-like Protein THYLAKOID FORMATION 1 chloroplastic chloroplast-localized Ptr ToxA-binding protein 1 protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic protein THYLAKOID FORMATION1, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma03010 Ribosome 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 11
gma01200 Carbon metabolism 11
gma00010 Glycolysis / Gluconeogenesis 5
gma00030 Pentose phosphate pathway 5
gma00051 Fructose and mannose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00195 Photosynthesis 3
vvi00710 Carbon fixation by Calvin cycle 3
vvi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
ppo00710 Carbon fixation by Calvin cycle 3
ppo01200 Carbon metabolism 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03010 Ribosome 3
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
cit00350 Tyrosine metabolism 2
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 5
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae03010 Ribosome 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae03010 Ribosome 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae00860 Porphyrin metabolism 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 6
sbi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101253003 102577610 107808613 107776485 816623 100796767 100779964 100814341 103842574 100259646 7494440 7494227 25487573 25492064 107898931 107948994 106368798 106415074 102609819 4343584 100382672 100193314 123188272 123044553 543119 123425712 8056327 100839581 5718977
The preparation time of this page was 0.1 [sec].